RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 OR2J3O76001 311 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 IL4P05112 153 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 SLC25A5P05141 298 aaKnown RBP6.32□□□□□ -1.4
CD44-205ENST00000352818 HOXA5P20719 270 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 RPL19P84098 196 aaKnown RBP6.32□□□□□ -1.4
CD44-205ENST00000352818 FABP9Q0Z7S8 132 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 COX19Q49B96 90 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 OR4F17Q8NGA8 305 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 FRZBQ92765 325 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 Q9H3A6 140 aa6.32□□□□□ -1.4
CD44-205ENST00000352818 DYNC1H1Q14204 4646 aaKnown RBP6.32□□□□□ -1.4
CD44-205ENST00000352818 TRBV7-1A0A0A6YYK4 115 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 PGPA6NDG6 321 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ZNF98A6NK75 572 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 BMPR1BO00238 502 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 LTAP01374 205 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 TCRAP04437 139 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 AMY1AP04745 511 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 IGF1P05019 195 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 CTSGP08311 255 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 TRGC1P0CF51 173 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 HOXD3P31249 432 aaPredicted RBP6.31□□□□□ -1.4
CD44-205ENST00000352818 CDX1P47902 265 aaPredicted RBP6.31□□□□□ -1.4
CD44-205ENST00000352818 RAB9AP51151 201 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ERVFC1-1P60608 527 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 UBE2G1P62253 170 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 RANP62826 216 aaKnown RBP6.31□□□□□ -1.4
CD44-205ENST00000352818 RHOGP84095 191 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 USF2Q15853 346 aaPredicted RBP6.31□□□□□ -1.4
CD44-205ENST00000352818 ECSCRQ19T08 205 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 RPEL1Q2QD12 228 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 COA6Q5JTJ3 125 aaKnown RBP6.31□□□□□ -1.4
CD44-205ENST00000352818 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 BLNKQ8WV28 456 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 EEF1AKMT3Q96AZ1 226 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ZNF414Q96IQ9 312 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 GPR82Q96P67 336 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ASCL2Q99929 193 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 CHRDL1Q9BU40 450 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ZNF586Q9NXT0 402 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 ZNF492Q9P255 531 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 PITPNC1Q9UKF7 332 aa6.31□□□□□ -1.4
CD44-205ENST00000352818 A0A087X0K7 114 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 TRAV41A0A0B4J266 112 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 SERTM2A0A1B0GWG4 89 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 OR2T8A6NH00 312 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 RPL7P18124 248 aaKnown RBP6.3□□□□□ -1.4
CD44-205ENST00000352818 ADMP35318 185 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 GNG5P63218 68 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 OR5I1Q13606 314 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 C15orf32Q32M92 178 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 NSUN5P1Q3KNT7 163 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 CT83Q5H943 113 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 IBA57Q5T440 356 aaKnown RBP6.3□□□□□ -1.4
CD44-205ENST00000352818 LEMD1Q68G75 181 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 SIGLEC15Q6ZMC9 328 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 Q86TA4 180 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 BAGE2Q86Y30 109 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 MLST8Q9BVC4 326 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 ZFAND3Q9H8U3 227 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 RABAC1Q9UI14 185 aa6.3□□□□□ -1.4
CD44-205ENST00000352818 ZNF320A2RRD8 509 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 FBLL1A6NHQ2 334 aaKnown RBP6.29□□□□□ -1.4
CD44-205ENST00000352818 SLC17A3O00476 420 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 IGHG2P01859 326 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 MT-ND6P03923 174 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 MGST1P10620 155 aaKnown RBP6.29□□□□□ -1.4
CD44-205ENST00000352818 IER3P46695 156 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 AKR1D1P51857 326 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 NDUFA6P56556 154 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 PSG9Q00887 426 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 RASL11AQ6T310 242 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 TMEM219Q86XT9 240 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 TMEM75Q8N9X5 138 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 LINC00479Q96M42 142 aa6.29□□□□□ -1.4
CD44-205ENST00000352818 RNASE7Q9H1E1 156 aaKnown RBP6.29□□□□□ -1.4
CD44-205ENST00000352818 HSPG2P98160 4391 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 VPS13DQ5THJ4 4388 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 TRAV34A0A0B4J273 112 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 C19orf71A6NCJ1 209 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 G3V318 75 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 H3BUX3 64 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 K7EQM0 130 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 GATCO43716 136 aaKnown RBP6.28□□□□□ -1.4
CD44-205ENST00000352818 IGLV2-11P01706 119 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 GPR183P32249 361 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 MEOX2P50222 304 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 RELQ04864 619 aaPredicted RBP6.28□□□□□ -1.4
CD44-205ENST00000352818 ATP5G2Q06055 141 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 WDR73Q6P4I2 378 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 TMEM183AQ8IXX5 376 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
CD44-205ENST00000352818 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms