RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 GTSCR1Q86UQ5 136 aa14.08□□□□□ -0.16
APP-202ENST00000348990 FAM215AQ9Y5M1 114 aa14.08□□□□□ -0.16
APP-202ENST00000348990 LEPP41159 167 aa14.08□□□□□ -0.16
APP-202ENST00000348990 TMEM75Q8N9X5 138 aa14.08□□□□□ -0.16
APP-202ENST00000348990 OR5A1Q8NGJ0 315 aa14.08□□□□□ -0.16
APP-202ENST00000348990 NPFFR1Q9GZQ6 430 aa14.08□□□□□ -0.16
APP-202ENST00000348990 TACC2O95359 2948 aa14.07□□□□□ -0.16
APP-202ENST00000348990 LOXP28300 417 aaPredicted RBP14.07□□□□□ -0.16
APP-202ENST00000348990 ADIPOQQ15848 244 aa14.07□□□□□ -0.16
APP-202ENST00000348990 SIGLEC15Q6ZMC9 328 aa14.07□□□□□ -0.16
APP-202ENST00000348990 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
APP-202ENST00000348990 SHANK2-AS3Q9BTD1 123 aa14.07□□□□□ -0.16
APP-202ENST00000348990 ADGRG4Q8IZF6 3080 aa14.07□□□□□ -0.16
APP-202ENST00000348990 TEX48A0A1B0GUV7 120 aa14.07□□□□□ -0.16
APP-202ENST00000348990 PRSS33Q8NF86 280 aa14.07□□□□□ -0.16
APP-202ENST00000348990 KALRNO60229 2985 aa14.07□□□□□ -0.16
APP-202ENST00000348990 PPIAL4CA0A0B4J2A2 164 aa14.06□□□□□ -0.16
APP-202ENST00000348990 PPIAL4GP0DN37 164 aa14.06□□□□□ -0.16
APP-202ENST00000348990 PTPRZ1P23471 2315 aaPredicted RBP14.06□□□□□ -0.16
APP-202ENST00000348990 FXYD2P54710 66 aa14.06□□□□□ -0.16
APP-202ENST00000348990 BSPH1Q075Z2 132 aa14.06□□□□□ -0.16
APP-202ENST00000348990 TMEM160Q9NX00 188 aa14.06□□□□□ -0.16
APP-202ENST00000348990 TMEM14CQ9P0S9 112 aa14.06□□□□□ -0.16
APP-202ENST00000348990 LYNX1G3V0Z9 82 aa14.06□□□□□ -0.16
APP-202ENST00000348990 LYNX1P0DP58 116 aa14.06□□□□□ -0.16
APP-202ENST00000348990 MTURNQ8N3F0 131 aa14.06□□□□□ -0.16
APP-202ENST00000348990 FOXC2Q99958 501 aa14.06□□□□□ -0.16
APP-202ENST00000348990 MSRB1Q9NZV6 116 aa14.06□□□□□ -0.16
APP-202ENST00000348990 S100A7AQ86SG5 101 aa14.06□□□□□ -0.16
APP-202ENST00000348990 SPAARA0A1B0GVQ0 90 aa14.05□□□□□ -0.16
APP-202ENST00000348990 ADAMTSL5Q6ZMM2 481 aa14.05□□□□□ -0.16
APP-202ENST00000348990 MAP1LC3AQ9H492 121 aa14.05□□□□□ -0.16
APP-202ENST00000348990 IGHV1-3A0A0C4DH29 117 aa14.05□□□□□ -0.16
APP-202ENST00000348990 VSTM5A8MXK1 200 aa14.05□□□□□ -0.16
APP-202ENST00000348990 MRGPRG-AS1Q2M3A8 158 aa14.05□□□□□ -0.16
APP-202ENST00000348990 RBPJQ06330 500 aa14.04□□□□□ -0.16
APP-202ENST00000348990 Q5PR19 223 aa14.04□□□□□ -0.16
APP-202ENST00000348990 TEX22C9J3V5 150 aa14.03□□□□□ -0.16
APP-202ENST00000348990 LINC00311Q8N616 119 aa14.03□□□□□ -0.16
APP-202ENST00000348990 BDP1A6H8Y1 2624 aa14.03□□□□□ -0.16
APP-202ENST00000348990 IGKV2D-26A0A0A0MRZ7 120 aa14.03□□□□□ -0.16
APP-202ENST00000348990 C16orf97H3BN30 126 aa14.03□□□□□ -0.16
APP-202ENST00000348990 I3L2K1 104 aa14.03□□□□□ -0.16
APP-202ENST00000348990 ZNF491Q8N8L2 437 aa14.03□□□□□ -0.16
APP-202ENST00000348990 CHAC1Q9BUX1 264 aa14.03□□□□□ -0.16
APP-202ENST00000348990 CHTOPQ9Y3Y2 248 aaKnown RBP14.03□□□□□ -0.16
APP-202ENST00000348990 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
APP-202ENST00000348990 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
APP-202ENST00000348990 ONECUT1Q9UBC0 465 aa14.03□□□□□ -0.16
APP-202ENST00000348990 PRSS47A8MTI9 375 aa14.02□□□□□ -0.16
APP-202ENST00000348990 EGR2P11161 476 aaPredicted RBP14.02□□□□□ -0.16
APP-202ENST00000348990 ABHD17AQ96GS6 310 aa14.02□□□□□ -0.16
APP-202ENST00000348990 GATA1P15976 413 aaPredicted RBP14.02□□□□□ -0.17
APP-202ENST00000348990 ZC2HC1BQ5TFG8 222 aa14.02□□□□□ -0.17
APP-202ENST00000348990 ARHGAP32A7KAX9 2087 aa14.02□□□□□ -0.17
APP-202ENST00000348990 H3BRN7 92 aa14.02□□□□□ -0.17
APP-202ENST00000348990 DPF1Q92782 380 aa14.02□□□□□ -0.17
APP-202ENST00000348990 GAS8-AS1O95177 125 aa14.01□□□□□ -0.17
APP-202ENST00000348990 ASCL5Q7RTU5 278 aa14.01□□□□□ -0.17
APP-202ENST00000348990 HLA-DMBP28068 263 aa14.01□□□□□ -0.17
APP-202ENST00000348990 NEGR1Q7Z3B1 354 aa14.01□□□□□ -0.17
APP-202ENST00000348990 AZU1P20160 251 aa14□□□□□ -0.17
APP-202ENST00000348990 SIVA1O15304 175 aa14□□□□□ -0.17
APP-202ENST00000348990 ZNF493Q6ZR52 646 aa14□□□□□ -0.17
APP-202ENST00000348990 UFC1Q9Y3C8 167 aa14□□□□□ -0.17
APP-202ENST00000348990 K7EIM0 57 aa14□□□□□ -0.17
APP-202ENST00000348990 IGKCP01834 107 aa14□□□□□ -0.17
APP-202ENST00000348990 AMTNQ6UX39 209 aa14□□□□□ -0.17
APP-202ENST00000348990 BUB1B-PAK6H3BSN5 160 aa13.99□□□□□ -0.17
APP-202ENST00000348990 TIMM23O14925 209 aa13.99□□□□□ -0.17
APP-202ENST00000348990 C16orf54Q6UWD8 224 aa13.99□□□□□ -0.17
APP-202ENST00000348990 LCNL1Q6ZST4 164 aa13.99□□□□□ -0.17
APP-202ENST00000348990 TMEM158Q8WZ71 300 aa13.99□□□□□ -0.17
APP-202ENST00000348990 VGLL1Q99990 258 aa13.99□□□□□ -0.17
APP-202ENST00000348990 TSSC4Q9Y5U2 329 aaPredicted RBP13.99□□□□□ -0.17
APP-202ENST00000348990 NCBP2LA6PVI3 153 aaKnown RBP13.99□□□□□ -0.17
APP-202ENST00000348990 SIGMAR1Q99720 223 aa13.99□□□□□ -0.17
APP-202ENST00000348990 IGHV3OR16-13A0A075B7E8 117 aa13.99□□□□□ -0.17
APP-202ENST00000348990 IGHV3-74A0A0B4J1X5 117 aa13.99□□□□□ -0.17
APP-202ENST00000348990 J3QR89 54 aa13.99□□□□□ -0.17
APP-202ENST00000348990 OVOL3O00110 214 aa13.99□□□□□ -0.17
APP-202ENST00000348990 BMI1P35226 326 aa13.99□□□□□ -0.17
APP-202ENST00000348990 LYPD1Q8N2G4 141 aa13.99□□□□□ -0.17
APP-202ENST00000348990 WFDC2Q14508 124 aa13.98□□□□□ -0.17
APP-202ENST00000348990 ETDBQ3ZM63 59 aa13.98□□□□□ -0.17
APP-202ENST00000348990 PVRIGQ6DKI7 326 aa13.98□□□□□ -0.17
APP-202ENST00000348990 RNASE6Q93091 150 aaKnown RBP13.98□□□□□ -0.17
APP-202ENST00000348990 PRR25Q96S07 402 aa13.98□□□□□ -0.17
APP-202ENST00000348990 HIST1H4GQ99525 98 aa13.98□□□□□ -0.17
APP-202ENST00000348990 RALYQ9UKM9 306 aaKnown RBP13.98□□□□□ -0.17
APP-202ENST00000348990 AKAP6Q13023 2319 aa13.98□□□□□ -0.17
APP-202ENST00000348990 TRAV40A0A0B4J280 105 aa13.98□□□□□ -0.17
APP-202ENST00000348990 K7EM74 188 aa13.98□□□□□ -0.17
APP-202ENST00000348990 SH2D6Q7Z4S9 175 aa13.98□□□□□ -0.17
APP-202ENST00000348990 KLK15Q9H2R5 256 aa13.98□□□□□ -0.17
APP-202ENST00000348990 LAMA5O15230 3695 aa13.97□□□□□ -0.17
APP-202ENST00000348990 TRBV25-1A0A075B6N4 114 aa13.97□□□□□ -0.17
APP-202ENST00000348990 TMEM8BA6NDV4 472 aa13.97□□□□□ -0.17
APP-202ENST00000348990 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
APP-202ENST00000348990 ZNF80P51504 273 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms