RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
MBD1-204ENST00000347968 CDX4O14627 284 aaPredicted RBP12.85□□□□□ -0.35
MBD1-204ENST00000347968 CRIP1P50238 77 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 A0A1W2PNU3 283 aaPredicted RBP12.85□□□□□ -0.35
MBD1-204ENST00000347968 KLF17Q5JT82 389 aaPredicted RBP12.85□□□□□ -0.35
MBD1-204ENST00000347968 CALYQ9NYX4 217 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 RP1L1Q8IWN7 2480 aaPredicted RBP12.85□□□□□ -0.35
MBD1-204ENST00000347968 LYZL6O75951 148 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 IGLV2-11P01706 119 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 FOLR3P41439 243 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 WT1-ASQ06250 92 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 MSRB1Q9NZV6 116 aa12.85□□□□□ -0.35
MBD1-204ENST00000347968 IGKV1D-17A0A075B6S4 117 aa12.84□□□□□ -0.35
MBD1-204ENST00000347968 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
MBD1-204ENST00000347968 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
MBD1-204ENST00000347968 RPUSD1Q9UJJ7 312 aaKnown RBP12.84□□□□□ -0.35
MBD1-204ENST00000347968 CRYGCP07315 174 aa12.84□□□□□ -0.35
MBD1-204ENST00000347968 CD59P13987 128 aa12.84□□□□□ -0.35
MBD1-204ENST00000347968 FAM104BQ5XKR9 115 aa12.84□□□□□ -0.35
MBD1-204ENST00000347968 M0R3E3 92 aa12.83□□□□□ -0.36
MBD1-204ENST00000347968 TIMM8AO60220 97 aaPredicted RBP12.83□□□□□ -0.36
MBD1-204ENST00000347968 CRLF1O75462 422 aa12.83□□□□□ -0.36
MBD1-204ENST00000347968 SPRNQ5BIV9 151 aa12.83□□□□□ -0.36
MBD1-204ENST00000347968 MGAQ8IWI9 3026 aa12.83□□□□□ -0.36
MBD1-204ENST00000347968 ERHP84090 104 aaKnown RBP12.82□□□□□ -0.36
MBD1-204ENST00000347968 PAX8Q06710 450 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 CNOT1A5YKK6 2376 aaKnown RBP12.82□□□□□ -0.36
MBD1-204ENST00000347968 TRAV4A0A0B4J268 109 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 VSTM5A8MXK1 200 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 LYZP61626 148 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 Q0VFX4 171 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 DEFB108BQ8NET1 73 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 OR10X1Q8NGY0 326 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 CEP250Q9BV73 2442 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 GP9P14770 177 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 KIR2DS2P43631 304 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 TWIST1Q15672 202 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 PPP1R35Q8TAP8 253 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
MBD1-204ENST00000347968 IL4P05112 153 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 HARBI1Q96MB7 349 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 IGKV3D-15A0A087WSY6 115 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 TMEM158Q8WZ71 300 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 DLX4Q92988 240 aaPredicted RBP12.81□□□□□ -0.36
MBD1-204ENST00000347968 CTSZQ9UBR2 303 aa12.81□□□□□ -0.36
MBD1-204ENST00000347968 GAGE12JA6NER3 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 HOXA3O43365 443 aaPredicted RBP12.8□□□□□ -0.36
MBD1-204ENST00000347968 GAGE7O76087 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 GAGE12FP0CL80 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 GAGE12GP0CL81 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 GAGE12IP0CL82 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 CT45A10P0DMU9 189 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 GAGE4Q13068 117 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 FAM159AQ6UWV7 190 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 C6orf15Q6UXA7 325 aaPredicted RBP12.8□□□□□ -0.36
MBD1-204ENST00000347968 MOGAT3Q86VF5 341 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 DPM2O94777 84 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 PLA2G2CQ5R387 149 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.8□□□□□ -0.36
MBD1-204ENST00000347968 PPDPFQ9H3Y8 114 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 ARL3P36405 182 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 Q6ZQT7 251 aa12.8□□□□□ -0.36
MBD1-204ENST00000347968 NDUFV3P56181 108 aaKnown RBP12.79□□□□□ -0.36
MBD1-204ENST00000347968 CITED1Q99966 193 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 C17orf58Q2M2W7 97 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 TMEM75Q8N9X5 138 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 PPDPFLQ8WWR9 84 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 TPSG1Q9NRR2 321 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 DSCAMO60469 2012 aa12.79□□□□□ -0.36
MBD1-204ENST00000347968 FABP5P3A8MUU1 101 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 IQCF6A8MYZ5 107 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 ANKRD29Q8N6D5 301 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 SPRY4Q9C004 299 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 CXXC4Q9H2H0 198 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 KLK15Q9H2R5 256 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 OTOGLQ3ZCN5 2332 aa12.78□□□□□ -0.36
MBD1-204ENST00000347968 RIF1Q5UIP0 2472 aaKnown RBP12.78□□□□□ -0.36
MBD1-204ENST00000347968 MEOX1P50221 254 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 ATP5J2P56134 94 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 GAGE2BQ13066 116 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 GAGE2EQ4V326 116 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 PRR7Q8TB68 274 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 RPEQ96AT9 228 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 MRPL20Q9BYC9 149 aaKnown RBP12.77□□□□□ -0.36
MBD1-204ENST00000347968 NDUFA4L2Q9NRX3 87 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 GAGE2DQ9UEU5 116 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 TNFRSF18Q9Y5U5 241 aa12.77□□□□□ -0.36
MBD1-204ENST00000347968 ZFHX2Q9C0A1 2572 aaPredicted RBP12.77□□□□□ -0.36
MBD1-204ENST00000347968 CGB1A6NKQ9 187 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 EFNA4P52798 201 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 PROCRQ9UNN8 238 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 COL27A1Q8IZC6 1860 aaPredicted RBP12.77□□□□□ -0.37
MBD1-204ENST00000347968 TACC2O95359 2948 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 TRBV7-3A0A075B6L6 115 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 ZNF688P0C7X2 276 aa12.77□□□□□ -0.37
MBD1-204ENST00000347968 FBXL15Q9H469 300 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms