RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 IGKV3-7A0A075B6H7 116 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 IGHV4OR15-8A0A075B7B6 117 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 A0A087WW49 117 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 TMEM89A2RUT3 159 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 ELANEP08246 267 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 CRIP1P50238 77 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 PSG9Q00887 426 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 FAM209BQ5JX69 171 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 LCN12Q6JVE5 192 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 C8orf86Q6ZUL3 223 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 TMEM86BQ8N661 226 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 Q8TAT8 98 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
CDC42-202ENST00000344548 DEFB1P60022 68 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 RNF152Q8N8N0 203 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 TMEM75Q8N9X5 138 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 ZC2HC1AQ96GY0 325 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 ZNF705GA8MUZ8 300 aaPredicted RBP10.32□□□□□ -0.76
CDC42-202ENST00000344548 SRD5A1P18405 259 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 RAB5BP61020 215 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 ERCC8Q13216 396 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 TMEM183AQ8IXX5 376 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 DUX3Q96PT4 197 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 IMMP2LQ96T52 175 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 RHPN1-AS1Q9BWJ2 59 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 SRD5A3Q9H8P0 318 aa10.32□□□□□ -0.76
CDC42-202ENST00000344548 C19orf71A6NCJ1 209 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 ZNF253O75346 499 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 SNRPEP62304 92 aaKnown RBP10.31□□□□□ -0.76
CDC42-202ENST00000344548 KCNIP4Q6PIL6 250 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 C20orf173Q96LM9 149 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 UBE2E2Q96LR5 201 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 IGHV7-4-1A0A0J9YVY3 117 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BKO60814 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BJP06899 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BOP23527 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BBP33778 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BDP58876 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BCP62807 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST2H2BEQ16778 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.31□□□□□ -0.76
CDC42-202ENST00000344548 FAM231DQ6ZW35 169 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 TEX29Q8N6K0 151 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 C11orf44Q8N8P7 122 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BHQ93079 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BNQ99877 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 HIST1H2BMQ99879 126 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 GPR61Q9BZJ8 451 aa10.31□□□□□ -0.76
CDC42-202ENST00000344548 DAZ1Q9NQZ3 744 aaKnown RBP10.31□□□□□ -0.76
CDC42-202ENST00000344548 TMEM213A2RRL7 107 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 TYMSP04818 313 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 S100A9P06702 114 aaKnown RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 ZNF705DP0CH99 300 aaPredicted RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 ZNF705BP0CI00 300 aaPredicted RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 SYNJ2BPP57105 145 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 RPEL1Q2QD12 228 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 SAV1Q9H4B6 383 aaPredicted RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 SETXQ7Z333 2677 aaKnown RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 SMIM27A0A1W2PRY6 76 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 GATCO43716 136 aaKnown RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 RPL19P84098 196 aaKnown RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 SRSF2Q01130 221 aaKnown RBP10.3□□□□□ -0.76
CDC42-202ENST00000344548 SMPXQ9UHP9 88 aa10.3□□□□□ -0.76
CDC42-202ENST00000344548 TRBV6-1A0A0K0K1D8 114 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 SOCS3O14543 225 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 GZMBP10144 247 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 S100A7P31151 101 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 CSN1S1P47710 185 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 PRR31Q5SQ13 230 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 SMIM12Q96EX1 92 aa10.29□□□□□ -0.76
CDC42-202ENST00000344548 FN1P02751 2386 aaKnown RBP10.29□□□□□ -0.76
CDC42-202ENST00000344548 NSD1Q96L73 2696 aaPredicted RBP10.28□□□□□ -0.76
CDC42-202ENST00000344548 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
CDC42-202ENST00000344548 ZNF80P51504 273 aaPredicted RBP10.28□□□□□ -0.76
CDC42-202ENST00000344548 FABP9Q0Z7S8 132 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 FAM106AQ4KMX7 169 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 GTSF1Q8WW33 167 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 C5orf52A6NGY3 159 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 CBLN1P23435 193 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 SLURP1P55000 103 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
CDC42-202ENST00000344548 WIPF2Q8TF74 440 aaPredicted RBP10.28□□□□□ -0.76
CDC42-202ENST00000344548 PRR25Q96S07 402 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 NEU1Q99519 415 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 SLC50A1Q9BRV3 221 aa10.28□□□□□ -0.76
CDC42-202ENST00000344548 K7EQM0 130 aa10.27□□□□□ -0.76
CDC42-202ENST00000344548 ADAMTSL5Q6ZMM2 481 aa10.27□□□□□ -0.76
CDC42-202ENST00000344548 GBGT1Q8N5D6 347 aa10.27□□□□□ -0.76
CDC42-202ENST00000344548 C16orf92Q96LL3 132 aa10.27□□□□□ -0.76
CDC42-202ENST00000344548 ZFP30Q9Y2G7 519 aa10.27□□□□□ -0.76
CDC42-202ENST00000344548 NPIPB6E9PJ23 425 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 K7EMT4 169 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 ACTL10Q5JWF8 245 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 MRPL54Q6P161 138 aaKnown RBP10.27□□□□□ -0.77
CDC42-202ENST00000344548 NUP35Q8NFH5 326 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 GRAMD2BQ96HH9 432 aa10.27□□□□□ -0.77
CDC42-202ENST00000344548 AGPAT4-IT1Q9H0P7 198 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms