RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 K7EN84 100 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 ISLRO14498 428 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 ZNF324O75467 553 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-201ENST00000343575 PSMB8P28062 276 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 FCGR2BP31994 310 aaPredicted RBP11.38□□□□□ -0.59
CXCL12-201ENST00000343575 AMTP48728 403 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 GNG4P50150 75 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 TIGITQ495A1 244 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 C19orf24Q9BVV8 132 aa11.38□□□□□ -0.59
CXCL12-201ENST00000343575 TRGV3P03979 118 aa11.37□□□□□ -0.59
CXCL12-201ENST00000343575 CTSGP08311 255 aa11.37□□□□□ -0.59
CXCL12-201ENST00000343575 MFAP4P55083 255 aa11.37□□□□□ -0.59
CXCL12-201ENST00000343575 HELTA6NFD8 242 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 SLC17A3O00476 420 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 HYPMO75409 117 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 TOMM40O96008 361 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 RAB9AP51151 201 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 LEMD1Q68G75 181 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 Q6ZN92 141 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 TMEM136Q6ZRR5 245 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 BORCS7Q96B45 105 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 A0A1W2PS18 150 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 OR2T8A6NH00 312 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 FAM223BA6NKX1 122 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 TCF21O43680 179 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 PF4V1P10720 104 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 CD33P20138 364 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 FAM223AQ8IWN6 122 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 OR8I2Q8N0Y5 310 aa11.36□□□□□ -0.59
CXCL12-201ENST00000343575 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
CXCL12-201ENST00000343575 K7EP13 123 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 GNG7O60262 68 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 PSG1P11464 419 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 ATP5G2Q06055 141 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 FAM162BQ5T6X4 162 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 PATE2Q6UY27 113 aa11.35□□□□□ -0.59
CXCL12-201ENST00000343575 WIPF2Q8TF74 440 aaPredicted RBP11.35□□□□□ -0.59
CXCL12-201ENST00000343575 SMIM27A0A1W2PRY6 76 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 CLEC3BP05452 202 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 PTTG1IPP53801 180 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 SRSF2Q01130 221 aaKnown RBP11.34□□□□□ -0.59
CXCL12-201ENST00000343575 Q56UQ5 140 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 SAPCD1Q5SSQ6 148 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 ZNF738Q8NE65 137 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 GPR183P32249 361 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 TAS2R45P59539 299 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 UBE2V1Q13404 147 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 CENPWQ5EE01 88 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 SPATA31B1PQ5VZV4 182 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 RNF152Q8N8N0 203 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 MYOZ3Q8TDC0 251 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 USMG5Q96IX5 58 aa11.34□□□□□ -0.59
CXCL12-201ENST00000343575 TECRQ9NZ01 308 aaKnown RBP11.34□□□□□ -0.59
CXCL12-201ENST00000343575 TRBV7-1A0A0A6YYK4 115 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 TMEM89A2RUT3 159 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 IZUMO1RA6ND01 250 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 APCSP02743 223 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 RPS20P60866 119 aaKnown RBP11.33□□□□□ -0.6
CXCL12-201ENST00000343575 MORN5Q5VZ52 161 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 EEF1AKMT3Q96AZ1 226 aa11.33□□□□□ -0.6
CXCL12-201ENST00000343575 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 A0A1W2PRE2 83 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 IGHV3-11P01762 117 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 C3orf79P0CE67 100 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 PLP1P60201 277 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 STPG4Q8N801 248 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 C16orf95Q9H693 158 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
CXCL12-201ENST00000343575 COX11Q9Y6N1 276 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 TEP1Q99973 2627 aaKnown RBP11.32□□□□□ -0.6
CXCL12-201ENST00000343575 F2Z2F3 143 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 PMCHP20382 165 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 TSPOP30536 169 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 TFPI2P48307 235 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 FOXE3Q13461 319 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 NIT1Q86X76 327 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 ZNF491Q8N8L2 437 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 LINC01006Q8NI28 216 aa11.32□□□□□ -0.6
CXCL12-201ENST00000343575 C2CD3Q4AC94 2353 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 TRAV9-2A0A087WT02 112 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 BMPR1BO00238 502 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 ELANEP08246 267 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 SRIP30626 198 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 CDKN1BP46527 198 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
CXCL12-201ENST00000343575 TSKUQ8WUA8 353 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 ATP6V0BQ99437 205 aa11.31□□□□□ -0.6
CXCL12-201ENST00000343575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
CXCL12-201ENST00000343575 SLC35B1P78383 322 aa11.3□□□□□ -0.6
CXCL12-201ENST00000343575 COTL1Q14019 142 aa11.3□□□□□ -0.6
CXCL12-201ENST00000343575 IBA57Q5T440 356 aaKnown RBP11.3□□□□□ -0.6
CXCL12-201ENST00000343575 FAM231DQ6ZW35 169 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms