RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 PRB4P10163 310 aaPredicted RBP11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 CSN1S1P47710 185 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 CRIP1P50238 77 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 PSG9Q00887 426 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 LY6DQ14210 128 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 CLEC5AQ9NY25 188 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 DCHS2Q6V1P9 2916 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 A0A1B0GW15 77 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 SERTM2A0A1B0GWG4 89 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 C20orf202A1L168 122 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 ARMS2P0C7Q2 107 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 HNRNPA3P51991 378 aaKnown RBP11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 Q6AWC8 147 aa11.79□□□□□ -0.52
TNFSF13-201ENST00000338784 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 CRXO43186 299 aaPredicted RBP11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 IGHV3-23P01764 117 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 ZNF25P17030 456 aaPredicted RBP11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 G0S2P27469 103 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 DMRTA1Q5VZB9 504 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 PTPN13Q12923 2485 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 CYB5R2Q6BCY4 276 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 GATD1Q8NB37 220 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 SIRPDQ9H106 197 aa11.78□□□□□ -0.52
TNFSF13-201ENST00000338784 CTSGP08311 255 aa11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 FAM106CPP0CH98 169 aa11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 EGR2P11161 476 aaPredicted RBP11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 COL5A1-AS1Q5SY13 56 aa11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 C1RLQ9NZP8 487 aa11.77□□□□□ -0.53
TNFSF13-201ENST00000338784 A0A1W2PPR1 153 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 OR5AL1P0C617 328 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 SPATA12Q7Z6I5 190 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 TPPP3Q9BW30 176 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 RABAC1Q9UI14 185 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 SYS1-DBNDD2H3BUS1 97 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 NDUFS7O75251 213 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 IGLL1P15814 213 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 Q8N9W7 124 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
TNFSF13-201ENST00000338784 TSPOP30536 169 aa11.75□□□□□ -0.53
TNFSF13-201ENST00000338784 S100A7P31151 101 aa11.75□□□□□ -0.53
TNFSF13-201ENST00000338784 ZNF138P52744 262 aa11.75□□□□□ -0.53
TNFSF13-201ENST00000338784 SAPCD1Q5SSQ6 148 aa11.75□□□□□ -0.53
TNFSF13-201ENST00000338784 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
TNFSF13-201ENST00000338784 IGHV2-70DA0A0C4DH43 119 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 OR4C46A6NHA9 309 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 UBE2E1P51965 193 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 LINC00173Q6ZV60 143 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 MRPS16Q9Y3D3 137 aaKnown RBP11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 FBLL1A6NHQ2 334 aaKnown RBP11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 CSN3P07498 182 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 ZNF493Q6ZR52 646 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
TNFSF13-201ENST00000338784 IGKV2-40A0A087WW87 121 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 SH2D1AO60880 128 aa11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 IGKV2D-40P01614 121 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 FAM110DQ8TAY7 271 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 MAP1LC3CQ9BXW4 147 aa11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 UBTD1Q9HAC8 227 aa11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 SMAD5-AS1Q9Y6J3 95 aa11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 HRNRQ86YZ3 2850 aaPredicted RBP11.73□□□□□ -0.53
TNFSF13-201ENST00000338784 DLEU1O43261 78 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 EFNA4P52798 201 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 LYZL1Q6UWQ5 148 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 PRR25Q96S07 402 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 TMSB15BA0A087X1C1 80 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 TFPI2P48307 235 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 GAGE1Q13065 139 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 UNQ5815/PRO19632Q6UWF5 114 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 PET117Q6UWS5 81 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 AJUBAQ96IF1 538 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 TMEM191AQ9H0A3 160 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 COL12A1Q99715 3063 aa11.72□□□□□ -0.53
TNFSF13-201ENST00000338784 UBR5O95071 2799 aaPredicted RBP11.71□□□□□ -0.53
TNFSF13-201ENST00000338784 ECSCRQ19T08 205 aa11.71□□□□□ -0.53
TNFSF13-201ENST00000338784 STPG4Q8N801 248 aa11.71□□□□□ -0.53
TNFSF13-201ENST00000338784 ZNF502Q8TBZ5 544 aa11.71□□□□□ -0.53
TNFSF13-201ENST00000338784 SPXQ9BT56 116 aa11.71□□□□□ -0.53
TNFSF13-201ENST00000338784 CSMD1Q96PZ7 3565 aa11.71□□□□□ -0.54
TNFSF13-201ENST00000338784 IGHV3-35A0A0C4DH35 117 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 GPR183P32249 361 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 SAA4P35542 130 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 PRSS3P2Q8NHM4 247 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 CLUHP3Q96NS8 147 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 ST20Q9HBF5 79 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 FLNCQ14315 2725 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 NBASA2RRP1 2371 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 ATP6V0E1O15342 81 aa11.7□□□□□ -0.54
TNFSF13-201ENST00000338784 IGHG4P01861 327 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms