RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SGK494Q96LW2 274 aa11.17□□□□□ -0.62
CDK5RAP3-201ENST00000338399 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
CDK5RAP3-201ENST00000338399 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
CDK5RAP3-201ENST00000338399 NDUFA11Q86Y39 141 aa11.16□□□□□ -0.62
CDK5RAP3-201ENST00000338399 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
CDK5RAP3-201ENST00000338399 AURKAIP1Q9NWT8 199 aaPredicted RBP11.16□□□□□ -0.62
CDK5RAP3-201ENST00000338399 TRAV8-2A0A0B4J237 113 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 M0QZ24 198 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ISLRO14498 428 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 RPL23P62829 140 aaKnown RBP11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ADIRFQ15847 76 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 CENPWQ5EE01 88 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 NRN1Q9NPD7 142 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 MLXQ9UH92 298 aa11.15□□□□□ -0.62
CDK5RAP3-201ENST00000338399 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 CSN1S1P47710 185 aa11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 UBE2G1P62253 170 aa11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PNRC1Q12796 327 aaPredicted RBP11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 GBGT1Q8N5D6 347 aa11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 OCC1Q8TAD7 63 aa11.15□□□□□ -0.63
CDK5RAP3-201ENST00000338399 C7orf77A4D0Y5 90 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 C9JCJ5 164 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 CSN3P07498 182 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 GNG4P50150 75 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TAS2R60P59551 318 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TMEM183BQ1AE95 376 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 IGF2BP2-AS1Q96M15 143 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 RPS10P5Q9NQ39 176 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TRAV8-1A0A0A6YYK1 113 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 SOCS3O14543 225 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 OVOL1O14753 267 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 LCN12Q6JVE5 192 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 LINC01551Q86U37 167 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
CDK5RAP3-201ENST00000338399 KRTAP24-1Q3LI83 254 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 K7EQM0 130 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 RHEBQ15382 184 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PSG3Q16557 428 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PRIMA1Q86XR5 153 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 BAGE2Q86Y30 109 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 ARL6IP6Q8N6S5 226 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 NHLRC2Q8NBF2 726 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 MS4A6AQ9H2W1 248 aa11.12□□□□□ -0.63
CDK5RAP3-201ENST00000338399 MAST4O15021 2626 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PRAC2D3DTV9 90 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 K7EN84 100 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 IGLV2-11P01706 119 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TFPI2P48307 235 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PRNTQ86SH4 94 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TMEM75Q8N9X5 138 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 CLEC5AQ9NY25 188 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
CDK5RAP3-201ENST00000338399 B4DEV8 164 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 IGLV2-8P01709 118 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 DYNLRB2Q8TF09 96 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 CITED1Q99966 193 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 SERTM2A0A1B0GWG4 89 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 OR5I1Q13606 314 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 Q86TA4 180 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 ZNF738Q8NE65 137 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 ISOC2Q96AB3 205 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 MRPL53Q96EL3 112 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 ASCL2Q99929 193 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PSG8Q9UQ74 426 aa11.1□□□□□ -0.63
CDK5RAP3-201ENST00000338399 LTAP01374 205 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 PF4P02776 101 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 RNF212Q495C1 297 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 TMEM88Q6PEY1 159 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 VGLL1Q99990 258 aa11.09□□□□□ -0.63
CDK5RAP3-201ENST00000338399 ID1P41134 155 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ERCC8Q13216 396 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 RBPMS2Q6ZRY4 209 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 CBLN2Q8IUK8 224 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TRBV6-1A0A0K0K1D8 114 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 K7EQG2 157 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 PAFAH1B2P68402 229 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 TMEM61Q8N0U2 210 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 FAM24BQ8N5W8 94 aa11.08□□□□□ -0.64
CDK5RAP3-201ENST00000338399 A0A087WWC5 75 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 GCGP01275 180 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 MT-ND4LP03901 98 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 DEFB1P60022 68 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 CD300EQ496F6 205 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 MLST8Q9BVC4 326 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 SIGLEC8Q9NYZ4 499 aa11.07□□□□□ -0.64
CDK5RAP3-201ENST00000338399 RBAKDNA6NC62 111 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
CDK5RAP3-201ENST00000338399 ZNF705DP0CH99 300 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms