RNA–Protein interactions for RNA: ENST00000324501.9

PSEN1-201, Transcript of presenilin 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PSEN1, Length 6,078 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-201ENST00000324501 TSKUQ8WUA8 353 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 PCDH15Q96QU1 1955 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 TRAV12-2A0A075B6T6 113 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 KNCNA6PVL3 124 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 C2orf88Q9BSF0 95 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 PCNX2A6NKB5 2137 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 C22orf34Q6ZV56 151 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 XCL2Q9UBD3 114 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 LOC107984156A0A0G2JMH3 177 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 CACNG7P62955 275 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 ARL17AQ8IVW1 177 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 CENPVL3A0A0U1RRI6 287 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 PLA2G2AP14555 144 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 LINC00311Q8N616 119 aa5.78□□□□□ -1.48
PSEN1-201ENST00000324501 D6R8Y8 96 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 TNRC18O15417 2968 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-201ENST00000324501 SPINK13Q1W4C9 94 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 Q6AWC8 147 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 PRDM13Q9H4Q3 707 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 APOC4P55056 127 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 ZNF726P1Q15940 193 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 LINC01551Q86U37 167 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 OR13C6PQ8NH95 151 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 MRAP2Q96G30 205 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 KAAG1Q9UBP8 84 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 SOX21Q9Y651 276 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-201ENST00000324501 PET117Q6UWS5 81 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 C9orf139Q6ZV77 190 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 NIT1Q86X76 327 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 LINC00518Q8N0U6 118 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 C14orf178Q8N769 122 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-201ENST00000324501 NUP35Q8NFH5 326 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 NRN1Q9NPD7 142 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 CCDC168Q8NDH2 2452 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 DEFB130BP0DP73 79 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 DEFB130AP0DP74 79 aa5.77□□□□□ -1.49
PSEN1-201ENST00000324501 RPL24P83731 157 aaKnown RBP5.77□□□□□ -1.49
PSEN1-201ENST00000324501 PHLDA1Q8WV24 401 aaPredicted RBP5.77□□□□□ -1.49
PSEN1-201ENST00000324501 IGHV3-16A0A0C4DH30 117 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 TEX48A0A1B0GUV7 120 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 MALP21145 153 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 SLC25A34Q6PIV7 304 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 GTF2H5Q6ZYL4 71 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 OR9G4Q8NGQ1 327 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 TMEM170AQ8WVE7 144 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 A0A1B0GW15 77 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 H3BUA1 57 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 ELANEP08246 267 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 TCTEX1D4Q5JR98 221 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 Q86TA4 180 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 C17orf77Q96MU5 243 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.76□□□□□ -1.49
PSEN1-201ENST00000324501 CD28P10747 220 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 LOXL1Q08397 574 aaPredicted RBP5.76□□□□□ -1.49
PSEN1-201ENST00000324501 C10orf105Q8TEF2 133 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 CHCHD5Q9BSY4 110 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 ALKBH7Q9BT30 221 aaPredicted RBP5.76□□□□□ -1.49
PSEN1-201ENST00000324501 PKIGQ9Y2B9 76 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 C8orf86Q6ZUL3 223 aa5.76□□□□□ -1.49
PSEN1-201ENST00000324501 TRAV1-1A0A0B4J248 108 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 INSP01308 110 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 HLA-DMBP28068 263 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 MST1LQ2TV78 715 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 PARD6GQ9BYG4 376 aaPredicted RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 MAP1AP78559 2803 aaPredicted RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 TNRC6AQ8NDV7 1962 aaKnown RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 C9JQL5 133 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 BLCAPP62952 87 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 SRSF1Q07955 248 aaKnown RBP eCLIP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 BCL6BQ8N143 479 aaPredicted RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 LINC00614P0C842 121 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 ADCYAP1P18509 176 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 VPREB3Q9UKI3 123 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 F2Z2F3 143 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 TSSC4Q9Y5U2 329 aaPredicted RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 TRAV9-1A0A075B6T8 112 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 CIRBPQ14011 172 aaKnown RBP5.75□□□□□ -1.49
PSEN1-201ENST00000324501 ERASQ7Z444 233 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 TTC9CQ8N5M4 171 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 GNB1LQ9BYB4 327 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 VCX2Q9H322 139 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 UQCR10Q9UDW1 63 aa5.75□□□□□ -1.49
PSEN1-201ENST00000324501 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 SLURP1P55000 103 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 C9orf66Q5T8R8 295 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 MRAPQ8TCY5 172 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 H3BRN7 92 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BKO60814 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 ATP5LO75964 103 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BJP06899 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BOP23527 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BBP33778 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 IFI27P40305 119 aaPredicted RBP5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BDP58876 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 NPC2P61916 151 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST1H2BCP62807 126 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 CTAG1AP78358 180 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 ESPL1Q14674 2120 aa5.74□□□□□ -1.49
PSEN1-201ENST00000324501 HIST2H2BEQ16778 126 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms