RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 OVOL3O00110 214 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 CTSGP08311 255 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 GPR183P32249 361 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 LY6DQ14210 128 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 TMEM189A5PLL7 270 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 FXYD7P58549 80 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 IGHV7-81A0A0B4J1V7 117 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 TTC9CQ8N5M4 171 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 VGLL1Q99990 258 aa13.6□□□□□ -0.23
COL9A1-201ENST00000320755 IGHV3-49A0A0A0MS15 119 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 SH2D1AO60880 128 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 FAM106CPP0CH98 169 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 FAM106AQ4KMX7 169 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 C16orf54Q6UWD8 224 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 AP5S1Q9NUS5 200 aa13.59□□□□□ -0.23
COL9A1-201ENST00000320755 RPL7P18124 248 aaKnown RBP13.58□□□□□ -0.23
COL9A1-201ENST00000320755 UNQ5815/PRO19632Q6UWF5 114 aa13.58□□□□□ -0.23
COL9A1-201ENST00000320755 S100A7AQ86SG5 101 aa13.58□□□□□ -0.23
COL9A1-201ENST00000320755 AMN1Q8IY45 258 aa13.58□□□□□ -0.23
COL9A1-201ENST00000320755 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
COL9A1-201ENST00000320755 C15orf32Q32M92 178 aa13.58□□□□□ -0.24
COL9A1-201ENST00000320755 FA2HQ7L5A8 372 aa13.58□□□□□ -0.24
COL9A1-201ENST00000320755 RABAC1Q9UI14 185 aa13.58□□□□□ -0.24
COL9A1-201ENST00000320755 C20orf202A1L168 122 aa13.58□□□□□ -0.24
COL9A1-201ENST00000320755 OR5AL1P0C617 328 aa13.58□□□□□ -0.24
COL9A1-201ENST00000320755 D6R8Y8 96 aa13.57□□□□□ -0.24
COL9A1-201ENST00000320755 IFI27P40305 119 aaPredicted RBP13.57□□□□□ -0.24
COL9A1-201ENST00000320755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.24
COL9A1-201ENST00000320755 TRBV6-1A0A0K0K1D8 114 aa13.57□□□□□ -0.24
COL9A1-201ENST00000320755 LINC01548A6NM66 108 aa13.57□□□□□ -0.24
COL9A1-201ENST00000320755 CLEC3BP05452 202 aa13.57□□□□□ -0.24
COL9A1-201ENST00000320755 SMAD5-AS1Q9Y6J3 95 aa13.57□□□□□ -0.24
COL9A1-201ENST00000320755 IGHV3OR16-10A0A075B7F0 116 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 G3V318 75 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 ZNF207O43670 478 aaKnown RBP13.56□□□□□ -0.24
COL9A1-201ENST00000320755 PDE6HQ13956 83 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 DMRTA1Q5VZB9 504 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 Q8N9W7 124 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 ZFHX3Q15911 3703 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 ZNF80P51504 273 aaPredicted RBP13.56□□□□□ -0.24
COL9A1-201ENST00000320755 TCTAP57738 103 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 PSG9Q00887 426 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 LOXL1Q08397 574 aaPredicted RBP13.56□□□□□ -0.24
COL9A1-201ENST00000320755 Q8N6K4 173 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 TMEM191AQ9H0A3 160 aa13.56□□□□□ -0.24
COL9A1-201ENST00000320755 SMKR1H3BMG3 65 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 UCNP55089 124 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 ERCC8Q13216 396 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 ERASQ7Z444 233 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 PRR25Q96S07 402 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 HSBP1L1C9JCN9 74 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 ORM1P02763 201 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 RHOGP84095 191 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 SAA4P35542 130 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 TWIST1Q15672 202 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 OR8A1Q8NGG7 326 aa13.55□□□□□ -0.24
COL9A1-201ENST00000320755 ATP6V0E1O15342 81 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 SNAI2O43623 268 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 CLEC19AQ6UXS0 136 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 HSPB8Q9UJY1 196 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 MRPS16Q9Y3D3 137 aaKnown RBP13.54□□□□□ -0.24
COL9A1-201ENST00000320755 CRXO43186 299 aaPredicted RBP13.54□□□□□ -0.24
COL9A1-201ENST00000320755 TCF21O43680 179 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 PPIFP30405 207 aaKnown RBP13.54□□□□□ -0.24
COL9A1-201ENST00000320755 BPESC1Q9GZL8 116 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 SIRPDQ9H106 197 aa13.54□□□□□ -0.24
COL9A1-201ENST00000320755 PRAC2D3DTV9 90 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 MINOS1Q5TGZ0 78 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 MINOS1-NBL1R4GNA1 71 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 ITPR1Q14643 2758 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 NCR2O95944 276 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 MPV17L2Q567V2 206 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 C1orf122Q6ZSJ8 110 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 PRELID3AQ96N28 172 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 DTX2Q86UW9 622 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 TMEM219Q86XT9 240 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
COL9A1-201ENST00000320755 MSRB1Q9NZV6 116 aa13.53□□□□□ -0.24
COL9A1-201ENST00000320755 SAPCD1Q5SSQ6 148 aa13.52□□□□□ -0.24
COL9A1-201ENST00000320755 SCGB2A1O75556 95 aa13.52□□□□□ -0.25
COL9A1-201ENST00000320755 IGHG4P01861 327 aa13.52□□□□□ -0.25
COL9A1-201ENST00000320755 Q6AWC8 147 aa13.52□□□□□ -0.25
COL9A1-201ENST00000320755 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
COL9A1-201ENST00000320755 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 OOSP1A8MZH6 123 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 NUDT3O95989 172 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 EBI3Q14213 229 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 WFDC3Q8IUB2 231 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 OR10AG1Q8NH19 301 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 VPS13CQ709C8 3753 aa13.51□□□□□ -0.25
COL9A1-201ENST00000320755 MRPL51Q4U2R6 128 aaKnown RBP13.5□□□□□ -0.25
COL9A1-201ENST00000320755 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 SLC25A34Q6PIV7 304 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 PET117Q6UWS5 81 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 FER1L6-AS1Q8NA97 138 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 ZNF747Q9BV97 191 aa13.5□□□□□ -0.25
COL9A1-201ENST00000320755 ST20Q9HBF5 79 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms