RNA–Protein interactions for RNA: ENST00000317991.9

GRAMD1A-201, Transcript of GRAM domain containing 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GRAMD1A, Length 2,695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-201ENST00000317991 Q6AWC8 147 aa17.53■□□□□ 0.4
GRAMD1A-201ENST00000317991 ZNF491Q8N8L2 437 aa17.53■□□□□ 0.4
GRAMD1A-201ENST00000317991 KLF17Q5JT82 389 aaPredicted RBP17.53■□□□□ 0.4
GRAMD1A-201ENST00000317991 TMEM108Q6UXF1 575 aa17.53■□□□□ 0.4
GRAMD1A-201ENST00000317991 K7EIM0 57 aa17.52■□□□□ 0.4
GRAMD1A-201ENST00000317991 MRPS12O15235 138 aaKnown RBP17.52■□□□□ 0.4
GRAMD1A-201ENST00000317991 CKS2P33552 79 aa17.52■□□□□ 0.4
GRAMD1A-201ENST00000317991 IGFBPL1Q8WX77 278 aa17.52■□□□□ 0.4
GRAMD1A-201ENST00000317991 GAS8-AS1O95177 125 aa17.52■□□□□ 0.39
GRAMD1A-201ENST00000317991 BSPH1Q075Z2 132 aa17.52■□□□□ 0.39
GRAMD1A-201ENST00000317991 PLGLAQ15195 96 aa17.52■□□□□ 0.39
GRAMD1A-201ENST00000317991 NPFFR1Q9GZQ6 430 aa17.52■□□□□ 0.39
GRAMD1A-201ENST00000317991 IGKV2D-26A0A0A0MRZ7 120 aa17.51■□□□□ 0.39
GRAMD1A-201ENST00000317991 OR4X2Q8NGF9 303 aa17.51■□□□□ 0.39
GRAMD1A-201ENST00000317991 RNF125Q96EQ8 232 aa17.51■□□□□ 0.39
GRAMD1A-201ENST00000317991 IGKV2-40A0A087WW87 121 aaPredicted RBP17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 IGKV2D-40P01614 121 aaPredicted RBP17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 PTPRZ1P23471 2315 aaPredicted RBP17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 TWIST1Q15672 202 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 SVEP1Q4LDE5 3571 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 COL25A1Q9BXS0 654 aaPredicted RBP17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 SIVA1O15304 175 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 COX7A1P24310 79 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 MSRB1Q9NZV6 116 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 BSNQ9UPA5 3926 aa17.5■□□□□ 0.39
GRAMD1A-201ENST00000317991 K7EM74 188 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 K7EMI3 77 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 CNIH1O95406 144 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 GCSHP23434 173 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 FXYD2P54710 66 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 WI2-2373I1.2A0A1W2PRP0 233 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 IGLV1-47P01700 117 aa17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 EGR2P11161 476 aaPredicted RBP17.49■□□□□ 0.39
GRAMD1A-201ENST00000317991 WNK2Q9Y3S1 2297 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 LRBAP50851 2863 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 K7ERJ3 54 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 DEFB124Q8NES8 71 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 Q8TAT8 98 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 IGFL4Q6B9Z1 124 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 LYPD1Q8N2G4 141 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 PIEZO2Q9H5I5 2752 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 DCHS2Q6V1P9 2916 aa17.48■□□□□ 0.39
GRAMD1A-201ENST00000317991 SPTBN2O15020 2390 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 BUB1B-PAK6H3BSN5 160 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 GOSR1O95249 250 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 SAMD5Q5TGI4 173 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 NPIPB5A8MRT5 1133 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 FABP2P12104 132 aa17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 ZNF80P51504 273 aaPredicted RBP17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 RPL24P83731 157 aaKnown RBP17.47■□□□□ 0.39
GRAMD1A-201ENST00000317991 SPAARA0A1B0GVQ0 90 aa17.46■□□□□ 0.39
GRAMD1A-201ENST00000317991 APC2O95996 2303 aa17.46■□□□□ 0.39
GRAMD1A-201ENST00000317991 OR5A1Q8NGJ0 315 aa17.45■□□□□ 0.38
GRAMD1A-201ENST00000317991 AAMDCQ9H7C9 122 aa17.45■□□□□ 0.38
GRAMD1A-201ENST00000317991 SMIM13P0DJ93 91 aa17.45■□□□□ 0.38
GRAMD1A-201ENST00000317991 ASCL5Q7RTU5 278 aa17.45■□□□□ 0.38
GRAMD1A-201ENST00000317991 ARHGAP32A7KAX9 2087 aa17.45■□□□□ 0.38
GRAMD1A-201ENST00000317991 LYNX1G3V0Z9 82 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 THBDP07204 575 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 LYNX1P0DP58 116 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 ZNF575Q86XF7 245 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 TEX48A0A1B0GUV7 120 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 RNASE6Q93091 150 aaKnown RBP17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 RPEQ96AT9 228 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 HHLA3Q9XRX5 114 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 FBLL1A6NHQ2 334 aaKnown RBP17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 EVI2AP22794 236 aa17.44■□□□□ 0.38
GRAMD1A-201ENST00000317991 C16orf97H3BN30 126 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 LEPP41159 167 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 PRR25Q96S07 402 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 HLA-DMBP28068 263 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 ZNF562Q6V9R5 426 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 VGLL1Q99990 258 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 KAAG1Q9UBP8 84 aa17.43■□□□□ 0.38
GRAMD1A-201ENST00000317991 GATA1P15976 413 aaPredicted RBP17.42■□□□□ 0.38
GRAMD1A-201ENST00000317991 ODF1Q14990 250 aa17.42■□□□□ 0.38
GRAMD1A-201ENST00000317991 GTSCR1Q86UQ5 136 aa17.42■□□□□ 0.38
GRAMD1A-201ENST00000317991 RNF185Q96GF1 192 aa17.42■□□□□ 0.38
GRAMD1A-201ENST00000317991 SH3BGRL2Q9UJC5 107 aa17.42■□□□□ 0.38
GRAMD1A-201ENST00000317991 ZNF207O43670 478 aaKnown RBP17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 IGHV3-23P01764 117 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 PRSS1P07477 247 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 GFRALQ6UXV0 394 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 DYNLRB1Q9NP97 96 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 GNG7O60262 68 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 CEACAM4O75871 244 aa17.41■□□□□ 0.38
GRAMD1A-201ENST00000317991 ANKRD11Q6UB99 2663 aaPredicted RBP17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 PPIFP30405 207 aaKnown RBP17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 PIP4P1Q86T03 277 aa17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 CHAC1Q9BUX1 264 aa17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 A0A0G2JNJ9 132 aa17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 Q9UFV3 132 aa17.4■□□□□ 0.38
GRAMD1A-201ENST00000317991 AGRNO00468 2067 aa17.39■□□□□ 0.38
GRAMD1A-201ENST00000317991 IGHV3OR16-8A0A075B7F1 116 aa17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 PPIAL4CA0A0B4J2A2 164 aa17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 TIMM23O14925 209 aa17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 PPIAL4GP0DN37 164 aa17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 TNFRSF14Q92956 283 aa17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 NHP2Q9NX24 153 aaKnown RBP17.39■□□□□ 0.37
GRAMD1A-201ENST00000317991 RALYQ9UKM9 306 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms