RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 IGLV1-47P01700 117 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 PRR31Q5SQ13 230 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 C18orf15Q96N68 181 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 HOXA3O43365 443 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 LAGE3Q14657 143 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 RBAKDNA6NC62 111 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 TEX22C9J3V5 150 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM178BH3BS89 294 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 CLEC3BP05452 202 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 HERVK_113P61574 105 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 GEMIN7Q9H840 131 aaKnown RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 DYNLRB1Q9NP97 96 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 FREM1Q5H8C1 2179 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 WI2-2373I1.2A0A1W2PRP0 233 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 WFDC2Q14508 124 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 DUX4L9Q6RFH8 374 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 GTSCR1Q86UQ5 136 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 C21orf62Q9NYP8 219 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 RALYQ9UKM9 306 aaKnown RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 YLPM1P49750 1951 aaKnown RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 K7EIM0 57 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 FOXI1Q12951 378 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 C8orf86Q6ZUL3 223 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 MRPL35Q9NZE8 188 aaKnown RBP3.75□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV1-3A0A0C4DH29 117 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 MRPS12O15235 138 aaKnown RBP3.75□□□□□ -1.81
PTPN13-201ENST00000316707 CD59P13987 128 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 TEN1Q86WV5 123 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 C1QTNF4Q9BXJ3 329 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 FBXL15Q9H469 300 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM160Q9NX00 188 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 IGKV2D-26A0A0A0MRZ7 120 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV3-21A0A0B4J1V1 117 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 CRIP1P50238 77 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 C20orf78Q9BR46 151 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM8BA6NDV4 472 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 OOSP1A8MZH6 123 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 C16orf97H3BN30 126 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 NBR2O15453 112 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 ASIPP42127 132 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 SCGB1D4Q6XE38 83 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 LENEPQ9Y5L5 61 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 DNAJC13O75165 2243 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 FAM106CPP0CH98 169 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 DLX6P56179 175 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
PTPN13-201ENST00000316707 FAM106AQ4KMX7 169 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 CCDC144NLQ6NUI1 221 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 TPSG1Q9NRR2 321 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 DNAH12Q6ZR08 3092 aa3.75□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV4-4A0A075B6R2 117 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SPINK8P0C7L1 97 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 EGR2P11161 476 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 C1orf210Q8IVY1 113 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 CCL17Q92583 94 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 DPM3Q9P2X0 92 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 MED12LQ86YW9 2145 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 A8MWV9 139 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 KLK10O43240 276 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SYT8Q8NBV8 401 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 C11orf68Q9H3H3 251 aaKnown RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 PGPEP1Q9NXJ5 209 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV3-72A0A0B4J1Y9 119 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 TRAV40A0A0B4J280 105 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 TNFRSF13BO14836 293 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 CFAP126Q5VTH2 177 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 MRPL53Q96EL3 112 aaKnown RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SMIM2Q9BVW6 85 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 ZNRD1Q9P1U0 126 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SVILO95425 2214 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 ADIPOQQ15848 244 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 MRGPRG-AS1Q2M3A8 158 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 IL17RELQ6ZVW7 336 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 DTX2Q86UW9 622 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SPANXDQ9BXN6 97 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 TRBV7-3A0A075B6L6 115 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 TRAV26-1A0A087WT03 109 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 S100A4P26447 101 aaKnown RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 CRYBA4P53673 196 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 C5orf64Q2M2E5 130 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 SPRNQ5BIV9 151 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM78Q5T7P6 136 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 BUB1B-PAK6H3BSN5 160 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 K7ERJ3 54 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 RNASE6Q93091 150 aaKnown RBP3.74□□□□□ -1.81
PTPN13-201ENST00000316707 RAXQ9Y2V3 346 aa3.74□□□□□ -1.81
PTPN13-201ENST00000316707 NCOR1O75376 2440 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV1-69DA0A0B4J2H0 117 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 M0R381 172 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 CDX4O14627 284 aaPredicted RBP3.73□□□□□ -1.81
PTPN13-201ENST00000316707 DIAPH2-AS1Q14236 149 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 AMTNQ6UX39 209 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 RNF185Q96GF1 192 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 FOXE3Q13461 319 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 Q5PR19 223 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 SH2D6Q7Z4S9 175 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 SCGB3A1Q96QR1 104 aa3.73□□□□□ -1.81
PTPN13-201ENST00000316707 TTTY13Q9BZ97 58 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms