RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 HIF1ANQ9NWT6 349 aa12.72□□□□□ -0.37
TVP23B-201ENST00000307767 H3BUX3 64 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 K7EQM0 130 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 Q8N976 141 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 URB1-AS1Q96HZ7 61 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 KCNS1Q96KK3 526 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 VGLL1Q99990 258 aa12.71□□□□□ -0.37
TVP23B-201ENST00000307767 IGHG2P01859 326 aa12.71□□□□□ -0.38
TVP23B-201ENST00000307767 BLCAPP62952 87 aa12.71□□□□□ -0.38
TVP23B-201ENST00000307767 ATP5G2Q06055 141 aa12.71□□□□□ -0.38
TVP23B-201ENST00000307767 NIT1Q86X76 327 aa12.71□□□□□ -0.38
TVP23B-201ENST00000307767 NAGKQ9UJ70 344 aa12.71□□□□□ -0.38
TVP23B-201ENST00000307767 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 SERTM2A0A1B0GWG4 89 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 B4DSR2 109 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 HAX1O00165 279 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 PRR25Q96S07 402 aa12.7□□□□□ -0.38
TVP23B-201ENST00000307767 MAP1AP78559 2803 aaPredicted RBP12.7□□□□□ -0.38
TVP23B-201ENST00000307767 IGHV3OR16-13A0A075B7E8 117 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 IGHV3-74A0A0B4J1X5 117 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 ZNF80P51504 273 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-201ENST00000307767 UBR5O95071 2799 aaPredicted RBP12.69□□□□□ -0.38
TVP23B-201ENST00000307767 FAM223BA6NKX1 122 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 SCGB1D1O95968 90 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 TRBV12-3P01733 135 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 CSN1S1P47710 185 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 FAM223AQ8IWN6 122 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 Q8TAT8 98 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 ATP6V0BQ99437 205 aa12.69□□□□□ -0.38
TVP23B-201ENST00000307767 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 ZNF207O43670 478 aaKnown RBP12.68□□□□□ -0.38
TVP23B-201ENST00000307767 ZNF324O75467 553 aaPredicted RBP12.68□□□□□ -0.38
TVP23B-201ENST00000307767 BRI3O95415 125 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 DDTP30046 118 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 DSCR9P59020 149 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 TDRG1Q3Y452 100 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 FAM19A2Q8N3H0 131 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 NRN1Q9NPD7 142 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 IGHV3-49A0A0A0MS15 119 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 TRGV3P03979 118 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 GATD1Q8NB37 220 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 C14orf144Q96I85 54 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 KLK15Q9H2R5 256 aa12.68□□□□□ -0.38
TVP23B-201ENST00000307767 SH2D1AO60880 128 aa12.67□□□□□ -0.38
TVP23B-201ENST00000307767 RELQ04864 619 aaPredicted RBP12.67□□□□□ -0.38
TVP23B-201ENST00000307767 C1orf194Q5T5A4 169 aa12.67□□□□□ -0.38
TVP23B-201ENST00000307767 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
TVP23B-201ENST00000307767 SIGLECL1Q8N7X8 197 aa12.67□□□□□ -0.38
TVP23B-201ENST00000307767 TSTD3H0UI37 97 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 PMCHP20382 165 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 AMTP48728 403 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 RAB9AP51151 201 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 KRTAP10-9P60411 292 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 SLC25A16P16260 332 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 ERCC8Q13216 396 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 UNQ9165/PRO28630Q6UXU0 137 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
TVP23B-201ENST00000307767 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.38
TVP23B-201ENST00000307767 LOC102724200A0A096LPH7 203 aaPredicted RBP12.65□□□□□ -0.38
TVP23B-201ENST00000307767 A0A1B0GUT8 65 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 A1L4Q6 167 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 CFHR3Q02985 330 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 FAM209BQ5JX69 171 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 LRRK2Q5S007 2527 aa12.65□□□□□ -0.38
TVP23B-201ENST00000307767 FAM208BQ5VWN6 2430 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 POLQO75417 2590 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 KIR2DL5BA0A0G2JN68 375 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 KIR2DL5BA0A0G2JPC4 375 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 IGLV1-40P01703 118 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 GATA3P23771 443 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 S100A7P31151 101 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 KIR2DL5AQ8N109 375 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 MAPK1IP1LQ8NDC0 245 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 METTL26Q96S19 204 aa12.64□□□□□ -0.39
TVP23B-201ENST00000307767 FBLL1A6NHQ2 334 aaKnown RBP12.63□□□□□ -0.39
TVP23B-201ENST00000307767 M0QZ24 198 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 CT45A10P0DMU9 189 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 COX6B1P14854 86 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 ARL3P36405 182 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 FAM162BQ5T6X4 162 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 LCNL1Q6ZST4 164 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 GLMPQ8WWB7 406 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 NDFIP1Q9BT67 221 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 USP9YO00507 2555 aaPredicted RBP12.63□□□□□ -0.39
TVP23B-201ENST00000307767 H3BUA1 57 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 SMAD7O15105 426 aaKnown RBP12.63□□□□□ -0.39
TVP23B-201ENST00000307767 REC114Q7Z4M0 266 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 LINC01356Q8N9X3 169 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 CSPG4Q6UVK1 2322 aa12.63□□□□□ -0.39
TVP23B-201ENST00000307767 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
TVP23B-201ENST00000307767 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.62□□□□□ -0.39
TVP23B-201ENST00000307767 TMEM189A5PLL7 270 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms