RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ERCC8Q13216 396 aa12.82□□□□□ -0.36
USP42-201ENST00000306177 GTF3C1Q12789 2109 aa12.82□□□□□ -0.36
USP42-201ENST00000306177 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
USP42-201ENST00000306177 DMRTC2Q8IXT2 367 aaPredicted RBP12.81□□□□□ -0.36
USP42-201ENST00000306177 DENND4CQ5VZ89 1909 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 A0A087WX48 190 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 RPL35AP18077 110 aaKnown RBP12.81□□□□□ -0.36
USP42-201ENST00000306177 CSTL1Q9H114 145 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 IGHV4-39P01824 125 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 C1orf194Q5T5A4 169 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 TEX43Q6ZNM6 134 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 ZNF492Q9P255 531 aa12.81□□□□□ -0.36
USP42-201ENST00000306177 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 C3orf79P0CE67 100 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 TMEM86BQ8N661 226 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 LSM4Q9Y4Z0 139 aaKnown RBP12.8□□□□□ -0.36
USP42-201ENST00000306177 OR5A1Q8NGJ0 315 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 Q5PR19 223 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 ZGRF1Q86YA3 2104 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 PLEKHB2Q96CS7 222 aa12.8□□□□□ -0.36
USP42-201ENST00000306177 WT1P19544 449 aaPredicted RBP12.79□□□□□ -0.36
USP42-201ENST00000306177 RNF114Q9Y508 228 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 ZNF479Q96JC4 524 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 A0A0U1RRA0 63 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 IL17RELQ6ZVW7 336 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 VGLL1Q99990 258 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 C9JQL5 133 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
USP42-201ENST00000306177 SYS1-DBNDD2H3BUS1 97 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 UBE2E2Q96LR5 201 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 LINC00158P58513 81 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 GUSBP1Q15486 140 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 TRBV19A0A075B6N1 114 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 ARMS2P0C7Q2 107 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 DOCK10Q96BY6 2186 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 FAM231BA6NCW3 169 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 G3V318 75 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 OR2K2Q8NGT1 345 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 SHANK1Q9Y566 2161 aa12.78□□□□□ -0.36
USP42-201ENST00000306177 SMKR1H3BMG3 65 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 ZNF134P52741 427 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 DEFB131AP59861 70 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 DEFB104AQ8WTQ1 72 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 FAM208BQ5VWN6 2430 aa12.77□□□□□ -0.36
USP42-201ENST00000306177 TRAV8-2A0A0B4J237 113 aa12.77□□□□□ -0.37
USP42-201ENST00000306177 CT83Q5H943 113 aa12.77□□□□□ -0.37
USP42-201ENST00000306177 RNF138Q8WVD3 245 aa12.77□□□□□ -0.37
USP42-201ENST00000306177 DKK1O94907 266 aa12.77□□□□□ -0.37
USP42-201ENST00000306177 A0A087WWL8 130 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 CKS1BP61024 79 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 WT1-ASQ06250 92 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 KAAG1Q9UBP8 84 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 ERG28Q9UKR5 140 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 hDV102S1A0JD36 115 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 M0R2P5 195 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.76□□□□□ -0.37
USP42-201ENST00000306177 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
USP42-201ENST00000306177 SAMD5Q5TGI4 173 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 MMP23AO75900 390 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 PYY3Q5JQD4 70 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 RASL10AQ92737 203 aa12.76□□□□□ -0.37
USP42-201ENST00000306177 ZNF726P1Q15940 193 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 MALRD1Q5VYJ5 2156 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 TCF15Q12870 199 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 BCL6BQ8N143 479 aaPredicted RBP12.75□□□□□ -0.37
USP42-201ENST00000306177 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 LINC01619G3V211 115 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 TNFRSF6BO95407 300 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 Q0VG73 95 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 TPSG1Q9NRR2 321 aa12.75□□□□□ -0.37
USP42-201ENST00000306177 TMEM95Q3KNT9 176 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 CYYR1Q96J86 154 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 C8orf49Q96NF6 230 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 MEGF9Q9H1U4 602 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 TMEM14CQ9P0S9 112 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 WIPF3A6NGB9 483 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 J3QLI3 93 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 Q8NFD4 153 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 C1orf159Q96HA4 380 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 Q96MF0 132 aa12.74□□□□□ -0.37
USP42-201ENST00000306177 PRSS46E5RG02 174 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 K7EM74 188 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
USP42-201ENST00000306177 A8MWV9 139 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 H3BRN7 92 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 NDUFA4O00483 81 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 ZC2HC1BQ5TFG8 222 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 TECTAO75443 2155 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 GGTLC3B5MD39 225 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 S100A7L2Q5SY68 101 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 IGFL2Q6UWQ7 119 aa12.73□□□□□ -0.37
USP42-201ENST00000306177 TRPT1Q86TN4 253 aaKnown RBP12.73□□□□□ -0.37
USP42-201ENST00000306177 SLX1AQ9BQ83 275 aa12.72□□□□□ -0.37
USP42-201ENST00000306177 PLXNB3Q9ULL4 1909 aa12.72□□□□□ -0.37
USP42-201ENST00000306177 TMEM213A2RRL7 107 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms