RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 BDP1A6H8Y1 2624 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 SDK1Q7Z5N4 2213 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 TRBV7-3A0A075B6L6 115 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 IGHV4-4A0A075B6R2 117 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 SMAD7O15105 426 aaKnown RBP4.21□□□□□ -1.74
VPS50-202ENST00000305866 HSBP1O75506 76 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 MRPL51Q4U2R6 128 aaKnown RBP4.21□□□□□ -1.74
VPS50-202ENST00000305866 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 FANCD2OSQ96PS1 177 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 PMCHL2Q9BQD1 86 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 SPANXB1Q9NS25 103 aaPredicted RBP4.21□□□□□ -1.74
VPS50-202ENST00000305866 C11orf21Q9P2W6 132 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 U3KQE9 123 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 MUC4Q99102 2169 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 AGRNO00468 2067 aa4.21□□□□□ -1.74
VPS50-202ENST00000305866 IGHV7-4-1A0A0J9YVY3 117 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 CENPVL3A0A0U1RRI6 287 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 A8MWL6 223 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 COX6B1P14854 86 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 EVI2AP22794 236 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 FXYD2P54710 66 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 ARF6P62330 175 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 PSMG4Q5JS54 123 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 GFRALQ6UXV0 394 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 C12orf54Q6X4T0 127 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 IL17RELQ6ZVW7 336 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 TMEM213A2RRL7 107 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 PRTN3P24158 256 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 CAMPP49913 170 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 LINC01559Q495D7 138 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 MORN3Q6PF18 240 aaPredicted RBP4.2□□□□□ -1.74
VPS50-202ENST00000305866 DKK2Q9UBU2 259 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 CLPSL1A2RUU4 121 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 NPYP01303 97 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 SLC25A5P05141 298 aaKnown RBP4.2□□□□□ -1.74
VPS50-202ENST00000305866 SMIM17P0DL12 118 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 CT45A10P0DMU9 189 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 AMELXQ99217 191 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 HIGD1AQ9Y241 93 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 MSRB2Q9Y3D2 182 aa4.2□□□□□ -1.74
VPS50-202ENST00000305866 DLX1P56177 255 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 COTL1Q14019 142 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 WFDC8Q8IUA0 241 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 APRG1Q8IVJ8 170 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 SBSPONQ8IVN8 264 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 RNF152Q8N8N0 203 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 SIRPDQ9H106 197 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 PEF1Q9UBV8 284 aaKnown RBP4.19□□□□□ -1.74
VPS50-202ENST00000305866 CCL8P80075 99 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 SRSF12Q8WXF0 261 aaKnown RBP4.19□□□□□ -1.74
VPS50-202ENST00000305866 FAM19A4Q96LR4 140 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 MEGF9Q9H1U4 602 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 CDIP1Q9H305 208 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 CADP27708 2225 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 H3BTX0 84 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 SRSF1Q07955 248 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS50-202ENST00000305866 OR4C5Q8NGB2 326 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 OR5A1Q8NGJ0 315 aa4.19□□□□□ -1.74
VPS50-202ENST00000305866 A0A1B0GUT8 65 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 LINC01548A6NM66 108 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 D6R8Y8 96 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 NBR2O15453 112 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 SLC25A17O43808 307 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 Q6ZQT7 251 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 LCNL1Q6ZST4 164 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 S100A7AQ86SG5 101 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 AMN1Q8IY45 258 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 SVIPQ8NHG7 77 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 FAM104AQ969W3 186 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 SCNM1Q9BWG6 230 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 TTTY13Q9BZ97 58 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 HIF1ANQ9NWT6 349 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 MSRB1Q9NZV6 116 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 PLCE1Q9P212 2302 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 P01737 135 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 HSD52Q0P140 79 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 OR9G4Q8NGQ1 327 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 ABCA2Q9BZC7 2435 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 COL12A1Q99715 3063 aa4.18□□□□□ -1.74
VPS50-202ENST00000305866 TRAV8-2A0A0B4J237 113 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 A0A0G2JLM5 398 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 CD3EP07766 207 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 NDPQ00604 133 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 C5orf64Q2M2E5 130 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 LYZL1Q6UWQ5 148 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 MAP1LC3CQ9BXW4 147 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 TMEM191AQ9H0A3 160 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 ZFAND3Q9H8U3 227 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 PSG8Q9UQ74 426 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 IGKV3D-20A0A0C4DH25 116 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 TRBV7-9A0A0J9YWB2 115 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 SH2D1AO60880 128 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 SCGB1A1P11684 91 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 ADORA2A-AS1P86434 159 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 PRR27Q6MZM9 219 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 CCDC144NLQ6NUI1 221 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 SERTAD4Q9NUC0 356 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 DPM3Q9P2X0 92 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 HSPB8Q9UJY1 196 aa4.17□□□□□ -1.74
VPS50-202ENST00000305866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms