RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 DYNLRB2Q8TF09 96 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 DDB2Q92466 427 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 FNDC10F2Z333 226 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 NDUFB8O95169 186 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 ORMDL3Q8N138 153 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 EBLN2Q6P2I7 272 aa11.45□□□□□ -0.58
TMEM47-201ENST00000275954 FLNAP21333 2647 aaKnown RBP11.44□□□□□ -0.58
TMEM47-201ENST00000275954 H3BUX3 64 aa11.44□□□□□ -0.58
TMEM47-201ENST00000275954 C3orf79P0CE67 100 aa11.44□□□□□ -0.58
TMEM47-201ENST00000275954 V9GYV3 84 aa11.44□□□□□ -0.58
TMEM47-201ENST00000275954 F2Z2F3 143 aa11.44□□□□□ -0.58
TMEM47-201ENST00000275954 MIEN1Q9BRT3 115 aa11.44□□□□□ -0.58
TMEM47-201ENST00000275954 GCSHP23434 173 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 VWC2Q2TAL6 325 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 BEND2Q8NDZ0 799 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 ZNF414Q96IQ9 312 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 C17orf77Q96MU5 243 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 GUSBP1Q15486 140 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 LYZL1Q6UWQ5 148 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 TMEM160Q9NX00 188 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 MRPL36Q9P0J6 103 aaKnown RBP11.43□□□□□ -0.58
TMEM47-201ENST00000275954 LY96Q9Y6Y9 160 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 ZNF562Q6V9R5 426 aa11.43□□□□□ -0.58
TMEM47-201ENST00000275954 DGAT2L7PQ6IED9 249 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 LINC00311Q8N616 119 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 SLAQ13239 276 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 SRSF9Q13242 221 aaKnown RBP eCLIP11.42□□□□□ -0.58
TMEM47-201ENST00000275954 RNF5Q99942 180 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 NCKAP5O14513 1909 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 TRAV8-6A0A0B4J262 113 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 TRAV41A0A0B4J266 112 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 M0R1W7 72 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 ARMS2P0C7Q2 107 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 RNASE4P34096 147 aaKnown RBP11.42□□□□□ -0.58
TMEM47-201ENST00000275954 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
TMEM47-201ENST00000275954 PAX8Q06710 450 aa11.42□□□□□ -0.58
TMEM47-201ENST00000275954 SMKR1H3BMG3 65 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 NPFFO15130 113 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 FAM159AQ6UWV7 190 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 KAAG1Q9UBP8 84 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 IGLC1P0CG04 106 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 SOX21Q9Y651 276 aaPredicted RBP11.41□□□□□ -0.58
TMEM47-201ENST00000275954 ATP6V0E1O15342 81 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 LBHQ53QV2 105 aaPredicted RBP11.41□□□□□ -0.58
TMEM47-201ENST00000275954 LAMTOR2Q9Y2Q5 125 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
TMEM47-201ENST00000275954 D6R8Y8 96 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 ERCC8Q13216 396 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 FXYD5Q96DB9 178 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 Q1RN00 199 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 RNF182Q8N6D2 247 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 BEX4Q9NWD9 120 aaPredicted RBP11.4□□□□□ -0.58
TMEM47-201ENST00000275954 TYMSP04818 313 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 MINOS1Q5TGZ0 78 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 Q86TA4 180 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 AMN1Q8IY45 258 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 MINOS1-NBL1R4GNA1 71 aa11.4□□□□□ -0.58
TMEM47-201ENST00000275954 TOMM40O96008 361 aa11.4□□□□□ -0.59
TMEM47-201ENST00000275954 SCGB1C2P0DMR2 95 aa11.4□□□□□ -0.59
TMEM47-201ENST00000275954 NUPR1O60356 82 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 P0C879 139 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 C1orf194Q5T5A4 169 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 H3BVH4 76 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 IGHV2-70P01814 119 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 PATE2Q6UY27 113 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 A0A0G2JLM5 398 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 hDV102S1A0JD36 115 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 LCNL1Q6ZST4 164 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 C18orf32Q8TCD1 76 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 C11orf52Q96A22 123 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 FOXC2Q99958 501 aa11.39□□□□□ -0.59
TMEM47-201ENST00000275954 CACNG7P62955 275 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 PSG3Q16557 428 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 Q6AWC8 147 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 Q6ZWC4 215 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 IGHV4-30-2A0A087WSY4 118 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 SH2D1AO60880 128 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 C8orf49Q96NF6 230 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 POLR3KQ9Y2Y1 108 aaPredicted RBP11.38□□□□□ -0.59
TMEM47-201ENST00000275954 TRAV9-2A0A087WT02 112 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 TMEM213A2RRL7 107 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 CGB3P0DN86 165 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 CGB7P0DN87 165 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 RCHY1Q96PM5 261 aa11.38□□□□□ -0.59
TMEM47-201ENST00000275954 ZNF56Q15929 161 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 ATP5L2Q7Z4Y8 100 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 A6NDN8 102 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 MOB4Q9Y3A3 225 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 EREGO14944 169 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 LEPP41159 167 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 YPEL3P61236 119 aaPredicted RBP11.37□□□□□ -0.59
TMEM47-201ENST00000275954 FAM120AOSQ5T036 256 aa11.37□□□□□ -0.59
TMEM47-201ENST00000275954 SLC50A1Q9BRV3 221 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms