RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 AAMDCQ9H7C9 122 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 PRNDQ9UKY0 176 aa7.29□□□□□ -1.24
PDGFC-201ENST00000274071 ZNF785A8K8V0 405 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 PATE3B3GLJ2 98 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 CRIP2P52943 208 aaPredicted RBP7.28□□□□□ -1.24
PDGFC-201ENST00000274071 ERVK-16P61578 105 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 RPS28P62857 69 aaKnown RBP7.28□□□□□ -1.24
PDGFC-201ENST00000274071 FAM104BQ5XKR9 115 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 PATE2Q6UY27 113 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 TNRC6BQ9UPQ9 1833 aaKnown RBP7.28□□□□□ -1.24
PDGFC-201ENST00000274071 TRAV2A0A0B4J234 112 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 SMKR1H3BMG3 65 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 ORM2P19652 201 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 C11orf53Q8IXP5 236 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 C10orf126Q8N4M7 172 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 KIR2DL5BQ8NHK3 375 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 RNF138Q8WVD3 245 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 NPIPB3Q92617 1050 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 MRPL35Q9NZE8 188 aaKnown RBP7.28□□□□□ -1.24
PDGFC-201ENST00000274071 NCOR1O75376 2440 aa7.28□□□□□ -1.24
PDGFC-201ENST00000274071 IGLV3-32A0A0A0MS00 114 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 C15orf61A6NNL5 157 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 NCBP2LA6PVI3 153 aaKnown RBP7.27□□□□□ -1.25
PDGFC-201ENST00000274071 F8WDY8 70 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 FSTL3O95633 263 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 CECR9P0C854 216 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 LEPP41159 167 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 MRPL51Q4U2R6 128 aaKnown RBP7.27□□□□□ -1.25
PDGFC-201ENST00000274071 NFAM1Q8NET5 270 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-201ENST00000274071 NTN5Q8WTR8 489 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-201ENST00000274071 FOXB1Q99853 325 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 OCIAD1Q9NX40 245 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 TRAV8-4A0A0B4J246 113 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 TM4SF5O14894 197 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 PSPNO60542 156 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 PLAUP00749 431 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 TCRAP04437 139 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 ZNF672Q499Z4 452 aaPredicted RBP7.27□□□□□ -1.25
PDGFC-201ENST00000274071 TMEM155Q4W5P6 130 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 C10orf113Q5VZT2 155 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 ASCL5Q7RTU5 278 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 C3orf22Q8N5N4 141 aa7.27□□□□□ -1.25
PDGFC-201ENST00000274071 COX7A2P2O60397 106 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 FLYWCH2Q96CP2 140 aaKnown RBP7.26□□□□□ -1.25
PDGFC-201ENST00000274071 PIMREGQ9BSJ6 248 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 TIMM23O14925 209 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 PCBD1P61457 104 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 FREM2Q5SZK8 3169 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 BDP1A6H8Y1 2624 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 RBAKDNA6NC62 111 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 OOEPA6NGQ2 149 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 ZNF134P52741 427 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 TMEM219Q86XT9 240 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 NDUFA11Q86Y39 141 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 TMEM14BQ9NUH8 114 aa7.26□□□□□ -1.25
PDGFC-201ENST00000274071 INTS1Q8N201 2190 aaKnown RBP7.26□□□□□ -1.25
PDGFC-201ENST00000274071 TECTAO75443 2155 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 TMEM30CPA0ZSE6 113 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 ATP5LO75964 103 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 TNFRSF6BO95407 300 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 FKBP2P26885 142 aaKnown RBP7.25□□□□□ -1.25
PDGFC-201ENST00000274071 CKS2P33552 79 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 UCNP55089 124 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 C4orf26Q17RF5 130 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 TRGV11A0A075B6L2 103 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 IGHV3OR15-7A0A075B7D8 119 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 H3BTX0 84 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 NDUFA3O95167 84 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 LGALS1P09382 135 aaKnown RBP7.25□□□□□ -1.25
PDGFC-201ENST00000274071 TNFAIP6P98066 277 aaPredicted RBP7.25□□□□□ -1.25
PDGFC-201ENST00000274071 TRPT1Q86TN4 253 aaKnown RBP7.25□□□□□ -1.25
PDGFC-201ENST00000274071 MRAPQ8TCY5 172 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 ZNF714Q96N38 554 aa7.25□□□□□ -1.25
PDGFC-201ENST00000274071 IL11RAQ14626 422 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 CEMP1Q6PRD7 247 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-201ENST00000274071 LINC00305Q7Z4B0 112 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 PRNTQ86SH4 94 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 Q86TA4 180 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 FOXA2Q9Y261 457 aaPredicted RBP7.24□□□□□ -1.25
PDGFC-201ENST00000274071 TNCP24821 2201 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 K7EM74 188 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 UQCRQO14949 82 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 IGLV2-11P01706 119 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 GATA4P43694 442 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 EFNA4P52798 201 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 ZNF56Q15929 161 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 RPL39P5Q59GN2 51 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 POM121L12Q8N7R1 296 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 OR4C13Q8NGP0 309 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 LINC00526Q96FQ7 95 aa7.24□□□□□ -1.25
PDGFC-201ENST00000274071 IGHV3-64DA0A0J9YX35 117 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 TRBV7-7A0A0K0K1E9 115 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 J3QT63 122 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 ZFAND5O76080 213 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 LPAL2Q16609 132 aa7.23□□□□□ -1.25
PDGFC-201ENST00000274071 MRPL14Q6P1L8 145 aaKnown RBP7.23□□□□□ -1.25
PDGFC-201ENST00000274071 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms