RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 AKAP6Q13023 2319 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 SH2D1AO60880 128 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 CACNG7P62955 275 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 PRELID3AQ96N28 172 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 MS4A6AQ9H2W1 248 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 JKAMPQ9P055 326 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 TMEM189A5PLL7 270 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 GRNP28799 593 aaKnown RBP13.25□□□□□ -0.29
RTN1-201ENST00000267484 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
RTN1-201ENST00000267484 PAX2Q02962 417 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 IGF2-ASQ6U949 168 aa13.25□□□□□ -0.29
RTN1-201ENST00000267484 PRSS57Q6UWY2 283 aa13.24□□□□□ -0.29
RTN1-201ENST00000267484 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
RTN1-201ENST00000267484 LY6LH3BQJ8 138 aa13.24□□□□□ -0.29
RTN1-201ENST00000267484 C7orf71A4D174 169 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 NPIPB5A8MRT5 1133 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 GAS8-AS1O95177 125 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 CDKN1BP46527 198 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
RTN1-201ENST00000267484 MRPL51Q4U2R6 128 aaKnown RBP13.23□□□□□ -0.29
RTN1-201ENST00000267484 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 MSRB1Q9NZV6 116 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 SPTBN1Q01082 2364 aaKnown RBP13.23□□□□□ -0.29
RTN1-201ENST00000267484 NBR2O15453 112 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 RABAC1Q9UI14 185 aa13.23□□□□□ -0.29
RTN1-201ENST00000267484 CD5LO43866 347 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 EGR2P11161 476 aaPredicted RBP13.22□□□□□ -0.29
RTN1-201ENST00000267484 NDPQ00604 133 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 FAM104BQ5XKR9 115 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 VGLL1Q99990 258 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 TRBV6-1A0A0K0K1D8 114 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 NPYP01303 97 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 CD3EP07766 207 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 C18orf15Q96N68 181 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 FGF6P10767 208 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 TWIST1Q15672 202 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 TMEM97Q5BJF2 176 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 THYN1Q9P016 225 aa13.22□□□□□ -0.29
RTN1-201ENST00000267484 WI2-2373I1.2A0A1W2PRP0 233 aa13.21□□□□□ -0.29
RTN1-201ENST00000267484 B9A039 149 aa13.21□□□□□ -0.29
RTN1-201ENST00000267484 HRNRQ86YZ3 2850 aaPredicted RBP13.21□□□□□ -0.29
RTN1-201ENST00000267484 NCBP2LA6PVI3 153 aaKnown RBP13.21□□□□□ -0.3
RTN1-201ENST00000267484 F8W735 103 aaPredicted RBP13.21□□□□□ -0.3
RTN1-201ENST00000267484 ORMDL3Q8N138 153 aa13.21□□□□□ -0.3
RTN1-201ENST00000267484 PPIFP30405 207 aaKnown RBP13.2□□□□□ -0.3
RTN1-201ENST00000267484 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
RTN1-201ENST00000267484 OCIAD2Q56VL3 154 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 VPS25Q9BRG1 176 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 TM4SF20Q53R12 229 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 ATRXP46100 2492 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 CKS2P33552 79 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 PCP2Q8IVA1 136 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 LYPD1Q8N2G4 141 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 GATD1Q8NB37 220 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 RAB37Q96AX2 223 aa13.2□□□□□ -0.3
RTN1-201ENST00000267484 NMUP48645 174 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 CFHR4Q92496 578 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 DKK2Q9UBU2 259 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 DPM3Q9P2X0 92 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 ZFHX3Q15911 3703 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 PRR25Q96S07 402 aa13.19□□□□□ -0.3
RTN1-201ENST00000267484 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 JMJD8Q96S16 334 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 TTTY13Q9BZ97 58 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 MFAP4P55083 255 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 Q6AWC8 147 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
RTN1-201ENST00000267484 PTPRQQ9UMZ3 2332 aa13.18□□□□□ -0.3
RTN1-201ENST00000267484 A0A1B0GW15 77 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 EVI2AP22794 236 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 ERCC8Q13216 396 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 IGHV3OR16-13A0A075B7E8 117 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 IGHV3-74A0A0B4J1X5 117 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 IGHV3-66A0A0C4DH42 116 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 ORM1P02763 201 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 C5orf64Q2M2E5 130 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 C21orf62Q9NYP8 219 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 SMAD5-AS1Q9Y6J3 95 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 H3BUT2 72 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 SAP30O75446 220 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 HBDP02042 147 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 GATA1P15976 413 aaPredicted RBP13.17□□□□□ -0.3
RTN1-201ENST00000267484 ZNF575Q86XF7 245 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 FER1L6-AS1Q8NA97 138 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 U3KQK5 164 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 MUC6Q6W4X9 2439 aa13.17□□□□□ -0.3
RTN1-201ENST00000267484 IFI27L1Q96BM0 104 aa13.16□□□□□ -0.3
RTN1-201ENST00000267484 IGHG4P01861 327 aa13.16□□□□□ -0.3
RTN1-201ENST00000267484 SAPCD1Q5SSQ6 148 aa13.16□□□□□ -0.3
RTN1-201ENST00000267484 ARPC1AQ92747 370 aa13.16□□□□□ -0.3
RTN1-201ENST00000267484 RNF5Q99942 180 aa13.16□□□□□ -0.3
RTN1-201ENST00000267484 GAGE10A6NGK3 116 aa13.15□□□□□ -0.3
RTN1-201ENST00000267484 PRAC2D3DTV9 90 aa13.15□□□□□ -0.3
RTN1-201ENST00000267484 NDUFS7O75251 213 aa13.15□□□□□ -0.3
RTN1-201ENST00000267484 RNF182Q8N6D2 247 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms