RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 IGLV2-11P01706 119 aa17.34■□□□□ 0.37
SMARCB1-201ENST00000263121 CSN1S1P47710 185 aa17.34■□□□□ 0.37
SMARCB1-201ENST00000263121 RNF212Q495C1 297 aa17.34■□□□□ 0.37
SMARCB1-201ENST00000263121 SMCO4Q9NRQ5 59 aa17.34■□□□□ 0.37
SMARCB1-201ENST00000263121 PRELID1Q9Y255 219 aa17.34■□□□□ 0.37
SMARCB1-201ENST00000263121 TRBV6-1A0A0K0K1D8 114 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 SERTM2A0A1B0GWG4 89 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 SOCS3O14543 225 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 CBLN1P23435 193 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 TCF24Q7RTU0 167 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 TMEM75Q8N9X5 138 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 SGK494Q96LW2 274 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 NRN1Q9NPD7 142 aa17.33■□□□□ 0.37
SMARCB1-201ENST00000263121 A0A1B0GUS0 222 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 BAGE2Q86Y30 109 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 RNF182Q8N6D2 247 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 DLX4Q92988 240 aaPredicted RBP17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 MRPL53Q96EL3 112 aaKnown RBP17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 CTDSP1Q9GZU7 261 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 TRAV8-1A0A0A6YYK1 113 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 ADARB2-AS1A8MUL3 147 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 K7EQM0 130 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 LTAP01374 205 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 MT-ND4LP03901 98 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 KRTAP10-3P60369 221 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 LCN12Q6JVE5 192 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 ADAMTSL5Q6ZMM2 481 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 Q86TA4 180 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 OR9G4Q8NGQ1 327 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 TUBA4BQ9H853 241 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 TMEM242Q9NWH2 141 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 CLEC5AQ9NY25 188 aa17.32■□□□□ 0.36
SMARCB1-201ENST00000263121 CCL24O00175 119 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 FOLR2P14207 255 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 PSG3Q16557 428 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 SMIM12Q96EX1 92 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 C16orf92Q96LL3 132 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 PEMTQ9UBM1 199 aa17.31■□□□□ 0.36
SMARCB1-201ENST00000263121 ZNF705FA8MVS1 300 aaPredicted RBP17.3■□□□□ 0.36
SMARCB1-201ENST00000263121 GCGP01275 180 aa17.3■□□□□ 0.36
SMARCB1-201ENST00000263121 PRB4P10163 310 aaPredicted RBP17.3■□□□□ 0.36
SMARCB1-201ENST00000263121 RPL11P62913 178 aaKnown RBP17.3■□□□□ 0.36
SMARCB1-201ENST00000263121 MLST8Q9BVC4 326 aa17.3■□□□□ 0.36
SMARCB1-201ENST00000263121 FLI1Q01543 452 aaPredicted RBP17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 NHLRC2Q8NBF2 726 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 ANAPC16Q96DE5 110 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 SFRP2Q96HF1 295 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 MLXQ9UH92 298 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 SELENOKQ9Y6D0 94 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 IGKV2-40A0A087WW87 121 aaPredicted RBP17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 IGKV2D-40P01614 121 aaPredicted RBP17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 OR5I1Q13606 314 aa17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.29■□□□□ 0.36
SMARCB1-201ENST00000263121 CXorf65A6NEN9 183 aa17.28■□□□□ 0.36
SMARCB1-201ENST00000263121 M0QZ24 198 aa17.28■□□□□ 0.36
SMARCB1-201ENST00000263121 PSG8Q9UQ74 426 aa17.28■□□□□ 0.36
SMARCB1-201ENST00000263121 PRAC2D3DTV9 90 aa17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 MGST1P10620 155 aaKnown RBP17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 PRNTQ86SH4 94 aa17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 DCANP1Q8TF63 244 aa17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 C20orf173Q96LM9 149 aa17.27■□□□□ 0.36
SMARCB1-201ENST00000263121 IGKV3-7A0A075B6H7 116 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 FBLL1A6NHQ2 334 aaKnown RBP17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 H7BYZ3 331 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 CSN3P07498 182 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 FOXL1Q12952 345 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 SAMD13Q5VXD3 122 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 RBAKDNA6NC62 111 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 PPP1R2P9O14990 202 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 NDUFA11Q86Y39 141 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 TMEM183AQ8IXX5 376 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 YPEL4Q96NS1 127 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 ZFP30Q9Y2G7 519 aa17.26■□□□□ 0.35
SMARCB1-201ENST00000263121 C2CD3Q4AC94 2353 aa17.25■□□□□ 0.35
SMARCB1-201ENST00000263121 OR10G8Q8NGN5 311 aa17.25■□□□□ 0.35
SMARCB1-201ENST00000263121 VGLL1Q99990 258 aa17.25■□□□□ 0.35
SMARCB1-201ENST00000263121 MS4A6AQ9H2W1 248 aa17.25■□□□□ 0.35
SMARCB1-201ENST00000263121 OSTCQ9NRP0 149 aa17.24■□□□□ 0.35
SMARCB1-201ENST00000263121 ERVFC1-1P60608 527 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 NSUN5P1Q3KNT7 163 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 GBGT1Q8N5D6 347 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 C15orf54Q8N8G6 183 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 COLCA2A8K830 154 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 FAM231DQ6ZW35 169 aa17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 RNASE7Q9H1E1 156 aaKnown RBP17.23■□□□□ 0.35
SMARCB1-201ENST00000263121 ZNF738Q8NE65 137 aa17.22■□□□□ 0.35
SMARCB1-201ENST00000263121 K7EQG2 157 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 OVOL1O14753 267 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 ID1P41134 155 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 ELOBQ15370 118 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 IBA57Q5T440 356 aaKnown RBP17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 FAM24BQ8N5W8 94 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 ASCL2Q99929 193 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 BIN3Q9NQY0 253 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 V9GYV3 84 aa17.21■□□□□ 0.35
SMARCB1-201ENST00000263121 ERCC8Q13216 396 aa17.2■□□□□ 0.34
SMARCB1-201ENST00000263121 COX8CQ7Z4L0 72 aa17.2■□□□□ 0.34
SMARCB1-201ENST00000263121 ZNF492Q9P255 531 aa17.2■□□□□ 0.34
SMARCB1-201ENST00000263121 URGCP-MRPS24S4R325 110 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms