RNA–Protein interactions for RNA: ENST00000261980.2

VSX2-201, Transcript of visual system homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX2, Length 2,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2-201ENST00000261980 CT83Q5H943 113 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 HIST1H4GQ99525 98 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 GFRA4Q9GZZ7 299 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 A0A1W2PPI3 338 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 PHLDA1Q8WV24 401 aaPredicted RBP13.09□□□□□ -0.31
VSX2-201ENST00000261980 MRAP2Q96G30 205 aa13.09□□□□□ -0.31
VSX2-201ENST00000261980 ZNF492Q9P255 531 aa13.08□□□□□ -0.31
VSX2-201ENST00000261980 SCGB1A1P11684 91 aa13.08□□□□□ -0.32
VSX2-201ENST00000261980 ZNF48Q96MX3 618 aaPredicted RBP13.08□□□□□ -0.32
VSX2-201ENST00000261980 A0A1W2PNU3 283 aaPredicted RBP13.08□□□□□ -0.32
VSX2-201ENST00000261980 WI2-2373I1.2A0A1W2PRP0 233 aa13.08□□□□□ -0.32
VSX2-201ENST00000261980 ZNF562Q6V9R5 426 aa13.08□□□□□ -0.32
VSX2-201ENST00000261980 CEND1Q8N111 149 aa13.08□□□□□ -0.32
VSX2-201ENST00000261980 SPATA25Q9BR10 227 aa13.08□□□□□ -0.32
VSX2-201ENST00000261980 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 NDUFA3O95167 84 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 ZNF883P0CG24 379 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 FHL3Q13643 280 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 Q8TAT8 98 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 DEFB104AQ8WTQ1 72 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 PCSK5Q92824 1860 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 ANKRD11Q6UB99 2663 aaPredicted RBP13.07□□□□□ -0.32
VSX2-201ENST00000261980 LOC107984156A0A0G2JMH3 177 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 TMEM8BA6NDV4 472 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 F8W1H4 67 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 CNTFRP26992 372 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 ARL17AQ8IVW1 177 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 OSR1Q8TAX0 266 aaPredicted RBP13.07□□□□□ -0.32
VSX2-201ENST00000261980 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
VSX2-201ENST00000261980 IGHV3OR16-8A0A075B7F1 116 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 TRGV5A0A0B4J1U4 118 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 KLK15Q9H2R5 256 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
VSX2-201ENST00000261980 NPIPB5A8MRT5 1133 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 OR10X1Q8NGY0 326 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 PSG8Q9UQ74 426 aa13.06□□□□□ -0.32
VSX2-201ENST00000261980 FAM104BQ5XKR9 115 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 IGFBPL1Q8WX77 278 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 HHLA3Q9XRX5 114 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 CYSLTR1Q9Y271 337 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 E9PLD3 99 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 XGP55808 180 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 C6orf15Q6UXA7 325 aaPredicted RBP13.05□□□□□ -0.32
VSX2-201ENST00000261980 DEFB124Q8NES8 71 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 HIGD1AQ9Y241 93 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 B5MCH6 92 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 SIVA1O15304 175 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 CT45A10P0DMU9 189 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 C3orf36Q3SXR2 165 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 C8orf86Q6ZUL3 223 aa13.05□□□□□ -0.32
VSX2-201ENST00000261980 CGB3P0DN86 165 aa13.04□□□□□ -0.32
VSX2-201ENST00000261980 CGB7P0DN87 165 aa13.04□□□□□ -0.32
VSX2-201ENST00000261980 SUB1P53999 127 aaKnown RBP eCLIP13.04□□□□□ -0.32
VSX2-201ENST00000261980 ODF1Q14990 250 aa13.04□□□□□ -0.32
VSX2-201ENST00000261980 NFE4Q86UQ8 179 aa13.04□□□□□ -0.32
VSX2-201ENST00000261980 MRPL16Q9NX20 251 aaKnown RBP13.04□□□□□ -0.32
VSX2-201ENST00000261980 IGKV2-40A0A087WW87 121 aaPredicted RBP13.03□□□□□ -0.32
VSX2-201ENST00000261980 H3BVH4 76 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 M0R1B8 84 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 IGKV2D-40P01614 121 aaPredicted RBP13.03□□□□□ -0.32
VSX2-201ENST00000261980 IGKCP01834 107 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 POU2AF1Q16633 256 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 SLC25A39Q9BZJ4 359 aaPredicted RBP13.03□□□□□ -0.32
VSX2-201ENST00000261980 MRPL35Q9NZE8 188 aaKnown RBP13.03□□□□□ -0.32
VSX2-201ENST00000261980 IGHV1-18A0A0C4DH31 117 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 FAM90A27PA6NNH2 459 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 CCL8P80075 99 aa13.03□□□□□ -0.32
VSX2-201ENST00000261980 PSMB2P49721 201 aa13.02□□□□□ -0.32
VSX2-201ENST00000261980 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
VSX2-201ENST00000261980 KIR2DL4Q99706 377 aa13.02□□□□□ -0.33
VSX2-201ENST00000261980 CDIP1Q9H305 208 aa13.02□□□□□ -0.33
VSX2-201ENST00000261980 IGKV3-15P01624 115 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 ZFP2Q6ZN57 461 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 C8orf46Q8TAG6 207 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 DPF1Q92782 380 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 FER1L6-AS2Q96M78 137 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 CTSZQ9UBR2 303 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 TRAV26-2A0A0B4J265 109 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 IGHV3-35A0A0C4DH35 117 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 PRSS29PA6NIE9 313 aa13.01□□□□□ -0.33
VSX2-201ENST00000261980 WT1P19544 449 aaPredicted RBP13.01□□□□□ -0.33
VSX2-201ENST00000261980 RALYQ9UKM9 306 aaKnown RBP13.01□□□□□ -0.33
VSX2-201ENST00000261980 EFNA4P52798 201 aa13□□□□□ -0.33
VSX2-201ENST00000261980 FOXI1Q12951 378 aa13□□□□□ -0.33
VSX2-201ENST00000261980 ACACBO00763 2458 aa13□□□□□ -0.33
VSX2-201ENST00000261980 SH2D1AO60880 128 aa13□□□□□ -0.33
VSX2-201ENST00000261980 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
VSX2-201ENST00000261980 THAP8Q8NA92 274 aa13□□□□□ -0.33
VSX2-201ENST00000261980 ZNF436-AS1Q8NC38 126 aaPredicted RBP13□□□□□ -0.33
VSX2-201ENST00000261980 ANAPC13Q9BS18 74 aa13□□□□□ -0.33
VSX2-201ENST00000261980 TRBV20-1A0A075B6N2 111 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 ORM1P02763 201 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 TMEM164Q5U3C3 297 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 Q6ZT83 130 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 UFC1Q9Y3C8 167 aa12.99□□□□□ -0.33
VSX2-201ENST00000261980 CNIH1O95406 144 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms