RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 DEFB1P60022 68 aa13.73□□□□□ -0.21
CYSTM1-201ENST00000261811 FAM74A1Q5RGS3 127 aa13.73□□□□□ -0.21
CYSTM1-201ENST00000261811 RARRES2Q99969 163 aa13.73□□□□□ -0.21
CYSTM1-201ENST00000261811 CSN1S1P47710 185 aa13.72□□□□□ -0.21
CYSTM1-201ENST00000261811 RPP25LQ8N5L8 163 aaKnown RBP13.72□□□□□ -0.21
CYSTM1-201ENST00000261811 RAB24Q969Q5 203 aa13.72□□□□□ -0.21
CYSTM1-201ENST00000261811 NDUFB4O95168 129 aa13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 CXorf1O96002 111 aa13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 SEC11BP0C7V7 166 aa13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 TPT1P13693 172 aaKnown RBP13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 EIF5AL1Q6IS14 154 aaKnown RBP13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 XCL2Q9UBD3 114 aa13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 TENM3Q9P273 2699 aa13.71□□□□□ -0.21
CYSTM1-201ENST00000261811 ZNF705FA8MVS1 300 aaPredicted RBP13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 STAG3L2P0CL84 134 aa13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 STAG3L3P0CL85 134 aa13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 RANP62826 216 aaKnown RBP13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 ICAM4Q14773 271 aa13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 ZFP69Q49AA0 526 aa13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
CYSTM1-201ENST00000261811 CTXND1A0A1B0GTU2 59 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 A8MTW9 85 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 UMAD1C9J7I0 102 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 HMGB3O15347 200 aaKnown RBP13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 ZNF705DP0CH99 300 aaPredicted RBP13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 ZNF705BP0CI00 300 aaPredicted RBP13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 ARL14EPLP0DKL9 152 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 BAP18Q8IXM2 172 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 EXOC3-AS1Q8N2X6 119 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 RXFP4Q8TDU9 374 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 ZNF503Q96F45 646 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 TMEM167BQ9NRX6 74 aa13.69□□□□□ -0.22
CYSTM1-201ENST00000261811 TSPOP30536 169 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 FXYD7P58549 80 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 LGALSLQ3ZCW2 172 aaPredicted RBP13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 IL17DQ8TAD2 202 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 CMTM2Q8TAZ6 248 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 PHYHIPLQ96FC7 376 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 SLC35B3Q9H1N7 401 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 Q9H3A6 140 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 GOLT1BQ9Y3E0 138 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 STAB2Q8WWQ8 2551 aa13.68□□□□□ -0.22
CYSTM1-201ENST00000261811 BOLA2-SMG1P6H3BVE0 249 aa13.67□□□□□ -0.22
CYSTM1-201ENST00000261811 GIG44P09565 113 aaPredicted RBP13.67□□□□□ -0.22
CYSTM1-201ENST00000261811 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
CYSTM1-201ENST00000261811 STOML3Q8TAV4 291 aa13.67□□□□□ -0.22
CYSTM1-201ENST00000261811 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 M0R3E3 92 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 MIFP14174 115 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 GCHFRP30047 84 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 LINC00477Q96M19 166 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 TMEM208Q9BTX3 173 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 OTORQ9NRC9 128 aa13.66□□□□□ -0.22
CYSTM1-201ENST00000261811 NPIPB6E9PJ23 425 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 INSP01308 110 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 CDKN1BP46527 198 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 SPINK13Q1W4C9 94 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 TMEM78Q5T7P6 136 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 AMTNQ6UX39 209 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 DPPA3Q6W0C5 159 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 IGF2BP2-AS1Q96M15 143 aa13.65□□□□□ -0.22
CYSTM1-201ENST00000261811 PGPA6NDG6 321 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 PRAC2D3DTV9 90 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 EIF3GO75821 320 aaKnown RBP eCLIP13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 LEPP41159 167 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 SLC51BQ86UW2 128 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 ARL6IP6Q8N6S5 226 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 ODF3Q96PU9 254 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 EDA2RQ9HAV5 297 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 M0R2Z0 102 aa13.64□□□□□ -0.23
CYSTM1-201ENST00000261811 DNAH9Q9NYC9 4486 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 IGHV3OR16-12A0A075B7B8 117 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 A0A0J9YWU9 116 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 RBAKDNA6NC62 111 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 MAP1LC3B2A6NCE7 125 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 SLC25A5P05141 298 aaKnown RBP13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 C9orf47Q6ZRZ4 202 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 TMEM256Q8N2U0 113 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 SUN5Q8TC36 379 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 TMED6Q8WW62 240 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 NEU1Q99519 415 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 MAP1LC3BQ9GZQ8 125 aa13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 C11orf68Q9H3H3 251 aaKnown RBP13.63□□□□□ -0.23
CYSTM1-201ENST00000261811 K7EQM0 130 aa13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 RAB5CP51148 216 aa13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 ZNF705AQ6ZN79 300 aaPredicted RBP13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 FAM213BQ8TBF2 198 aa13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 C20orf144Q9BQM9 153 aa13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 NKX6-2Q9C056 277 aaPredicted RBP13.62□□□□□ -0.23
CYSTM1-201ENST00000261811 SERTM2A0A1B0GWG4 89 aa13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 HBE1P02100 147 aa13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 PRB4P10163 310 aaPredicted RBP13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 ZNF726P1Q15940 193 aa13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 SSX7Q7RTT5 188 aa13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 MUC7Q8TAX7 377 aa13.61□□□□□ -0.23
CYSTM1-201ENST00000261811 IGKV2-40A0A087WW87 121 aaPredicted RBP13.6□□□□□ -0.23
CYSTM1-201ENST00000261811 A0A1W2PRE2 83 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms