RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 A0A1W2PPQ1 181 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 ZNF320A2RRD8 509 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 ZNF785A8K8V0 405 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 ELANEP08246 267 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 FAM3BP58499 235 aaPredicted RBP17.12■□□□□ 0.33
SIX3-201ENST00000260653 PSG9Q00887 426 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 TMEM190Q8WZ59 177 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 IGLV2-11P01706 119 aa17.12■□□□□ 0.33
SIX3-201ENST00000260653 LTAP01374 205 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 C1QL4Q86Z23 238 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 V9GYV3 84 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 A0A087X0K7 114 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 DIRC3C9JPN6 131 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 HLA-DMBP28068 263 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 WDR73Q6P4I2 378 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 Q71RC1 249 aaPredicted RBP17.11■□□□□ 0.33
SIX3-201ENST00000260653 Q86TA4 180 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 MYOZ3Q8TDC0 251 aa17.11■□□□□ 0.33
SIX3-201ENST00000260653 UBE2CO00762 179 aa17.1■□□□□ 0.33
SIX3-201ENST00000260653 IBA57Q5T440 356 aaKnown RBP17.1■□□□□ 0.33
SIX3-201ENST00000260653 ZNF331Q9NQX6 463 aaPredicted RBP17.1■□□□□ 0.33
SIX3-201ENST00000260653 ZNF253O75346 499 aa17.1■□□□□ 0.33
SIX3-201ENST00000260653 PRR27Q6MZM9 219 aa17.1■□□□□ 0.33
SIX3-201ENST00000260653 PYGO2Q9BRQ0 406 aa17.1■□□□□ 0.33
SIX3-201ENST00000260653 MLST8Q9BVC4 326 aa17.1■□□□□ 0.33
SIX3-201ENST00000260653 C1orf196B1AJZ1 125 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 KCNIP4Q6PIL6 250 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 OSTCQ9NRP0 149 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 Q6ZSV7 163 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 PRNTQ86SH4 94 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 GLMPQ8WWB7 406 aa17.09■□□□□ 0.33
SIX3-201ENST00000260653 RNF152Q8N8N0 203 aa17.08■□□□□ 0.33
SIX3-201ENST00000260653 CLUHP3Q96NS8 147 aa17.08■□□□□ 0.33
SIX3-201ENST00000260653 IMMP2LQ96T52 175 aa17.08■□□□□ 0.33
SIX3-201ENST00000260653 TM4SF20Q53R12 229 aa17.08■□□□□ 0.32
SIX3-201ENST00000260653 KLHDC1Q8N7A1 406 aa17.08■□□□□ 0.32
SIX3-201ENST00000260653 TMEM75Q8N9X5 138 aa17.08■□□□□ 0.32
SIX3-201ENST00000260653 ASCL2Q99929 193 aa17.08■□□□□ 0.32
SIX3-201ENST00000260653 CSN1S1P47710 185 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 SMIM12Q96EX1 92 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 IL36BQ9NZH7 164 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 K7EQM0 130 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 FOXL1Q12952 345 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 PSG3Q16557 428 aa17.07■□□□□ 0.32
SIX3-201ENST00000260653 C5orf52A6NGY3 159 aa17.06■□□□□ 0.32
SIX3-201ENST00000260653 ZNF705FA8MVS1 300 aaPredicted RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 LGALS1P09382 135 aaKnown RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 RAB5BP61020 215 aa17.06■□□□□ 0.32
SIX3-201ENST00000260653 RNF182Q8N6D2 247 aa17.06■□□□□ 0.32
SIX3-201ENST00000260653 UBE2E2Q96LR5 201 aa17.06■□□□□ 0.32
SIX3-201ENST00000260653 DAZ1Q9NQZ3 744 aaKnown RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 SETD2Q9BYW2 2564 aaPredicted RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 IGKV2-40A0A087WW87 121 aaPredicted RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 IGKV2D-40P01614 121 aaPredicted RBP17.06■□□□□ 0.32
SIX3-201ENST00000260653 GOLT1BQ9Y3E0 138 aa17.06■□□□□ 0.32
SIX3-201ENST00000260653 CHEK1O14757 476 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 LY6G6DO95868 133 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 EDN2P20800 178 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 RPEL1Q2QD12 228 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 FAM106AQ4KMX7 169 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 C8orf86Q6ZUL3 223 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 GPHB5Q86YW7 130 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 TMEM160Q9NX00 188 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 PSG8Q9UQ74 426 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 LINC00322Q6ZN03 302 aaPredicted RBP17.05■□□□□ 0.32
SIX3-201ENST00000260653 NUDT10Q8NFP7 164 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 NUDT11Q96G61 164 aa17.05■□□□□ 0.32
SIX3-201ENST00000260653 TRBV6-1A0A0K0K1D8 114 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 ZNF705GA8MUZ8 300 aaPredicted RBP17.04■□□□□ 0.32
SIX3-201ENST00000260653 CA1P00915 261 aaPredicted RBP17.04■□□□□ 0.32
SIX3-201ENST00000260653 SRD5A1P18405 259 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 FAM231DQ6ZW35 169 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 TMEM183AQ8IXX5 376 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 SLC50A1Q9BRV3 221 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 FLNBO75369 2602 aaKnown RBP17.04■□□□□ 0.32
SIX3-201ENST00000260653 IGHV7-4-1A0A0J9YVY3 117 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 TRGC2P03986 189 aa17.04■□□□□ 0.32
SIX3-201ENST00000260653 IGHV4OR15-8A0A075B7B6 117 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 A0A087WW49 117 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 TRAV8-2A0A0B4J237 113 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 LCN12Q6JVE5 192 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 C18orf65Q6ZTR6 163 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 GRAMD2BQ96HH9 432 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 RHPN1-AS1Q9BWJ2 59 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 SELENOKQ9Y6D0 94 aa17.03■□□□□ 0.32
SIX3-201ENST00000260653 A0A1W2PS18 150 aa17.02■□□□□ 0.32
SIX3-201ENST00000260653 SCGB2A2Q13296 93 aa17.02■□□□□ 0.32
SIX3-201ENST00000260653 TCTEX1D4Q5JR98 221 aa17.02■□□□□ 0.32
SIX3-201ENST00000260653 SRD5A3Q9H8P0 318 aa17.02■□□□□ 0.32
SIX3-201ENST00000260653 SERTM2A0A1B0GWG4 89 aa17.02■□□□□ 0.31
SIX3-201ENST00000260653 LINC00614P0C842 121 aa17.02■□□□□ 0.31
SIX3-201ENST00000260653 PRAC2D3DTV9 90 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 TCL1AP56279 114 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 J3KRW8 73 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 HIST2H2BDQ6DRA6 164 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 ZC2HC1AQ96GY0 325 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 VGLL1Q99990 258 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 SMPXQ9UHP9 88 aa17.01■□□□□ 0.31
SIX3-201ENST00000260653 ZFP30Q9Y2G7 519 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms