RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 C1RLQ9NZP8 487 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 PEF1Q9UBV8 284 aaKnown RBP3.76□□□□□ -1.81
USP44-201ENST00000258499 CFAP47Q6ZTR5 3102 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 SFTPCP11686 197 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 HLA-DMBP28068 263 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 CTRLP40313 264 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 PSG9Q00887 426 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 HIST1H1AQ02539 215 aaPredicted RBP3.76□□□□□ -1.81
USP44-201ENST00000258499 FAM120AOSQ5T036 256 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 TMEM78Q5T7P6 136 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 FAM71F2Q6NXP2 309 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 CLEC19AQ6UXS0 136 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 RNASE8Q8TDE3 154 aaKnown RBP3.76□□□□□ -1.81
USP44-201ENST00000258499 DEFB104AQ8WTQ1 72 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 TNFRSF14Q92956 283 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 IFI27L1Q96BM0 104 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 MBD6Q96DN6 1003 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 ZNF492Q9P255 531 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 PSMB11A5LHX3 300 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 HBDP02042 147 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 MGPP08493 103 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 LEPP41159 167 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 KLF5Q13887 457 aaPredicted RBP3.76□□□□□ -1.81
USP44-201ENST00000258499 C5orf64Q2M2E5 130 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 CT83Q5H943 113 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 Q6AWC8 147 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 PRSS57Q6UWY2 283 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 Q71RC1 249 aaPredicted RBP3.76□□□□□ -1.81
USP44-201ENST00000258499 FOXC2Q99958 501 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 KRTAP4-8Q9BYQ9 185 aa3.76□□□□□ -1.81
USP44-201ENST00000258499 NDUFB8O95169 186 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 FAM106CPP0CH98 169 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 DLX6P56179 175 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 ERCC8Q13216 396 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 C3orf36Q3SXR2 165 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 ZNF491Q8N8L2 437 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 Q8N976 141 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 C16orf92Q96LL3 132 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 DMXL2Q8TDJ6 3036 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 SHISA9B4DS77 424 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 M0R381 172 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 RHOGP84095 191 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 C15orf32Q32M92 178 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 BVES-AS1Q5T3Y7 98 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 RNF182Q8N6D2 247 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 MYOZ3Q8TDC0 251 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 SMIM12Q96EX1 92 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 COL25A1Q9BXS0 654 aaPredicted RBP3.75□□□□□ -1.81
USP44-201ENST00000258499 GFRA4Q9GZZ7 299 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 F5H697 171 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 K7EIM0 57 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 CEACAM4O75871 244 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 SPATA12Q7Z6I5 190 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 BCL6BQ8N143 479 aaPredicted RBP3.75□□□□□ -1.81
USP44-201ENST00000258499 LINC00574Q9H8X3 128 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 SIGLEC8Q9NYZ4 499 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 KLF12Q9Y4X4 402 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 C2CD3Q4AC94 2353 aa3.75□□□□□ -1.81
USP44-201ENST00000258499 A0A1B0GXF2 115 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 FABP5P3A8MUU1 101 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 TEX22C9J3V5 150 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 I3L2K1 104 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 NDPQ00604 133 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 FAM106AQ4KMX7 169 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 SIGLEC15Q6ZMC9 328 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 METTL26Q96S19 204 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 VGLL1Q99990 258 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 MLST8Q9BVC4 326 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 MS4A6AQ9H2W1 248 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 SORL1Q92673 2214 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 A0A1B0GW15 77 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 GAGE12BA1L429 117 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 FAM231BA6NCW3 169 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 NPYP01303 97 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 IGLV1-47P01700 117 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 FABP2P12104 132 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 RIPPLY3P57055 190 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 RPS20P60866 119 aaKnown RBP3.74□□□□□ -1.81
USP44-201ENST00000258499 LOXL1Q08397 574 aaPredicted RBP3.74□□□□□ -1.81
USP44-201ENST00000258499 LY6EQ16553 131 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 MRPL51Q4U2R6 128 aaKnown RBP3.74□□□□□ -1.81
USP44-201ENST00000258499 VMO1Q7Z5L0 202 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 TMEM219Q86XT9 240 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 GLMPQ8WWB7 406 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 NEU4Q8WWR8 484 aaPredicted RBP3.74□□□□□ -1.81
USP44-201ENST00000258499 ZNF747Q9BV97 191 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 MSRB1Q9NZV6 116 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 KAAG1Q9UBP8 84 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 C19orf71A6NCJ1 209 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 PRSS47A8MTI9 375 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 H3BRN7 92 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 CRYGCP07315 174 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 PLP1P60201 277 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 FAM104BQ5XKR9 115 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 SCGB1D4Q6XE38 83 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 GTSCR1Q86UQ5 136 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 VKORC1Q9BQB6 163 aa3.74□□□□□ -1.81
USP44-201ENST00000258499 NHP2Q9NX24 153 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms