RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.71
VHL-201ENST00000256474 CKS2P33552 79 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 ERCC8Q13216 396 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 COX11Q9Y6N1 276 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 FOXE3Q13461 319 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 PRSS22Q9GZN4 317 aa10.64□□□□□ -0.71
VHL-201ENST00000256474 SPRY2O43597 315 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 CRIP1P50238 77 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 CACNG7P62955 275 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 TCF15Q12870 199 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 PRSS57Q6UWY2 283 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 SHANK2-AS3Q9BTD1 123 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 MSRB1Q9NZV6 116 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 PSG3Q16557 428 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 C21orf62Q9NYP8 219 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 PTPN13Q12923 2485 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 IGLV2-11P01706 119 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 MFAP4P55083 255 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 NDPQ00604 133 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 FAM162BQ5T6X4 162 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 AMMECR1LQ6DCA0 310 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 SIGLEC15Q6ZMC9 328 aa10.63□□□□□ -0.71
VHL-201ENST00000256474 VGLL1Q99990 258 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 KAAG1Q9UBP8 84 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 SH2D1AO60880 128 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 ARPC1AQ92747 370 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 FAM71F2Q6NXP2 309 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 OR10AG1Q8NH19 301 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 AP1S3Q96PC3 154 aa10.62□□□□□ -0.71
VHL-201ENST00000256474 RAB1BQ9H0U4 201 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 ACACBO00763 2458 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 INS-IGF2F8WCM5 200 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 TNFRSF13BO14836 293 aaPredicted RBP10.61□□□□□ -0.71
VHL-201ENST00000256474 DYNAPQ8N1N2 210 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
VHL-201ENST00000256474 ZNF414Q96IQ9 312 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 THYN1Q9P016 225 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 UFC1Q9Y3C8 167 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 MRPS16Q9Y3D3 137 aaKnown RBP10.61□□□□□ -0.71
VHL-201ENST00000256474 HIVEP3Q5T1R4 2406 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 CEACAM3P40198 252 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 ZNF492Q9P255 531 aa10.61□□□□□ -0.71
VHL-201ENST00000256474 CRYGBP07316 175 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 NEU4Q8WWR8 484 aaPredicted RBP10.6□□□□□ -0.71
VHL-201ENST00000256474 C2CD3Q4AC94 2353 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 RPL11P62913 178 aaKnown RBP10.6□□□□□ -0.71
VHL-201ENST00000256474 GAGE1Q13065 139 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 UBE2V1Q13404 147 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 C5orf64Q2M2E5 130 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 C1RLQ9NZP8 487 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 H3BRN7 92 aa10.6□□□□□ -0.71
VHL-201ENST00000256474 GATA1P15976 413 aaPredicted RBP10.6□□□□□ -0.71
VHL-201ENST00000256474 PRSS1P07477 247 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 TTTY13Q9BZ97 58 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 SFTPCP11686 197 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 HAX1O00165 279 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 CLEC19AQ6UXS0 136 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 TMEM219Q86XT9 240 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 UBTD1Q9HAC8 227 aa10.59□□□□□ -0.71
VHL-201ENST00000256474 G3V318 75 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 K7EMI3 77 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 GAS8-AS1O95177 125 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 EGR2P11161 476 aaPredicted RBP10.58□□□□□ -0.72
VHL-201ENST00000256474 VMO1Q7Z5L0 202 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 NDFIP1Q9BT67 221 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 KLK15Q9H2R5 256 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 ST20Q9HBF5 79 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 HIF1ANQ9NWT6 349 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 CLEC3BP05452 202 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 ZNF80P51504 273 aaPredicted RBP10.58□□□□□ -0.72
VHL-201ENST00000256474 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 TNFRSF14Q92956 283 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 SOX21Q9Y651 276 aaPredicted RBP10.58□□□□□ -0.72
VHL-201ENST00000256474 NPYP01303 97 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 BVES-AS1Q5T3Y7 98 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 PVRIGQ6DKI7 326 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 FER1L6-AS1Q8NA97 138 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 ORAOV1Q8WV07 137 aa10.58□□□□□ -0.72
VHL-201ENST00000256474 CT83Q5H943 113 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 RABAC1Q9UI14 185 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 RIPPLY3P57055 190 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 C15orf32Q32M92 178 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 FANCD2OSQ96PS1 177 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 VKORC1Q9BQB6 163 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 ZNF747Q9BV97 191 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 SORL1Q92673 2214 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 MRPL51Q4U2R6 128 aaKnown RBP10.57□□□□□ -0.72
VHL-201ENST00000256474 PET117Q6UWS5 81 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 GFRA4Q9GZZ7 299 aa10.57□□□□□ -0.72
VHL-201ENST00000256474 CENPEQ02224 2701 aa10.56□□□□□ -0.72
VHL-201ENST00000256474 PLP1P60201 277 aa10.56□□□□□ -0.72
VHL-201ENST00000256474 RHOGP84095 191 aa10.56□□□□□ -0.72
VHL-201ENST00000256474 MRPL52Q86TS9 123 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms