RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PAX8Q06710 450 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 FAM106AQ4KMX7 169 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 SPTBN5Q9NRC6 3674 aaKnown RBP9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 TMEM213A2RRL7 107 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 GP9P14770 177 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 FBLN7Q53RD9 439 aa9.78□□□□□ -0.84
TM9SF4-201ENST00000217315 SORL1Q92673 2214 aa9.77□□□□□ -0.84
TM9SF4-201ENST00000217315 SMKR1H3BMG3 65 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 H3BRN7 92 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 ID1P41134 155 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 RAB37Q96AX2 223 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 C1orf159Q96HA4 380 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 USP9XQ93008 2570 aaPredicted RBP9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 FBLL1A6NHQ2 334 aaKnown RBP9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 SYS1-DBNDD2H3BUS1 97 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 I3L2K1 104 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 CACNG7P62955 275 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 ERCC8Q13216 396 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 CT83Q5H943 113 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 RUSC1-AS1Q66K80 236 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 FRYLO94915 3013 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 MGAQ8IWI9 3026 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 A6NDN8 102 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 TEX22C9J3V5 150 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 SRD5A1P18405 259 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 PDE6HQ13956 83 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 RNF182Q8N6D2 247 aa9.77□□□□□ -0.85
TM9SF4-201ENST00000217315 NAV2Q8IVL1 2488 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 GFRA4Q9GZZ7 299 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 CBY1Q9Y3M2 126 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 MYO18BQ8IUG5 2567 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 WNK1Q9H4A3 2382 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 UBE2E1P51965 193 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 MYO15AQ9UKN7 3530 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 H3BUX3 64 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 LTAP01374 205 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 GCSHP23434 173 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 ADORA2A-AS1P86434 159 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 MOB4Q9Y3A3 225 aa9.76□□□□□ -0.85
TM9SF4-201ENST00000217315 HBDP02042 147 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 OR11H6Q8NGC7 330 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 TMEM160Q9NX00 188 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 COL6A3P12111 3177 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 IFI27P40305 119 aaPredicted RBP9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 SCGB1D4Q6XE38 83 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 TMEM75Q8N9X5 138 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 FAM231BA6NCW3 169 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 TGFAP01135 160 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 HLA-DMBP28068 263 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 FAM120AOSQ5T036 256 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 JKAMPQ9P055 326 aa9.75□□□□□ -0.85
TM9SF4-201ENST00000217315 IGLV2-8P01709 118 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 LEPP41159 167 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 FAM74A4Q5TZK3 123 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 TEX43Q6ZNM6 134 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 A0A0G2JLM5 398 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 TSPOP30536 169 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 MAJINQ3KP22 176 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 WFDC12Q8WWY7 111 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 IFI27L1Q96BM0 104 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 FOXC2Q99958 501 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 C2CD3Q4AC94 2353 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 IGHV2-70DA0A0C4DH43 119 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 CRYGCP07315 174 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 IGLC2P0DOY2 106 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 COX6B1P14854 86 aa9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 SP5Q6BEB4 398 aaPredicted RBP9.74□□□□□ -0.85
TM9SF4-201ENST00000217315 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 H3BVH4 76 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 RNASE4P34096 147 aaKnown RBP9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 EBLN2Q6P2I7 272 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 FAM159AQ6UWV7 190 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 TMEM208Q9BTX3 173 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 ST20Q9HBF5 79 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 PRR25Q96S07 402 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 ZNF502Q8TBZ5 544 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 VGLL1Q99990 258 aa9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 SETD2Q9BYW2 2564 aaPredicted RBP9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 TET2Q6N021 2002 aaPredicted RBP9.73□□□□□ -0.85
TM9SF4-201ENST00000217315 ASIPP42127 132 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 FAM110DQ8TAY7 271 aaPredicted RBP9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 MPV17L2Q567V2 206 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 IGHV1-24A0A0C4DH33 117 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 PPBPP02775 128 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 IGLL1P15814 213 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 PLP1P60201 277 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 GTF2H5Q6ZYL4 71 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 GTSF1Q8WW33 167 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 NPFFR1Q9GZQ6 430 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 KIR2DL5BA0A0G2JN68 375 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 KIR2DL5BA0A0G2JPC4 375 aa9.72□□□□□ -0.85
TM9SF4-201ENST00000217315 GAGE10A6NGK3 116 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 220.5 ms