RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 HLA-DMBP28068 263 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 ARFGEF3Q5TH69 2177 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 SLAQ13239 276 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 CDPF1Q6NVV7 123 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 ZNF562Q6V9R5 426 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 SEC11AP67812 179 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE12BA1L429 117 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 C17orf77Q96MU5 243 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 GVINP1Q7Z2Y8 2422 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 TIMM21Q9BVV7 248 aa10.95□□□□□ -0.66
TGFBR3-201ENST00000212355 K7EMI3 77 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 Q6ZR03 302 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 TMEM75Q8N9X5 138 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 SPOCK3Q9BQ16 436 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 PAX9P55771 341 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 PRIMA1Q86XR5 153 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 TRAV1-1A0A0B4J248 108 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 RPL36AP83881 106 aaKnown RBP10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 RPL36ALQ969Q0 106 aaKnown RBP10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 NXPH4O95158 308 aa10.94□□□□□ -0.66
TGFBR3-201ENST00000212355 SPRNQ5BIV9 151 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 ARTNQ5T4W7 220 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 MORN5Q5VZ52 161 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 MORN3Q6PF18 240 aaPredicted RBP10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 VCYO14598 125 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 IGKV1-39P01597 117 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 IGKV1D-39P04432 117 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 SLC25A16P16260 332 aa10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 KLF2Q9Y5W3 355 aaPredicted RBP10.93□□□□□ -0.66
TGFBR3-201ENST00000212355 A0A1B0GW64 132 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 NPSP0C0P6 89 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 RLFQ13129 1914 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 ZNF134P52741 427 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 SPTBN1Q01082 2364 aaKnown RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 TNFRSF14Q92956 283 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 MBD3L4A6NDZ8 208 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 MBD3L3A6NE82 208 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 MBD3L5A6NJ08 208 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 Q6ZWC4 215 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 MBD3L2Q8NHZ7 208 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 C17orf82Q86X59 251 aaPredicted RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 SRSF8Q9BRL6 282 aaKnown RBP10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 DYSFO75923 2080 aa10.92□□□□□ -0.66
TGFBR3-201ENST00000212355 SPINK8P0C7L1 97 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 C17orf58Q2M2W7 97 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 UBE2V1Q13404 147 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 VWC2Q2TAL6 325 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE7O76087 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE12FP0CL80 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE12GP0CL81 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE12IP0CL82 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 C18orf32Q8TCD1 76 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 SHANK2-AS3Q9BTD1 123 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GAGE6Q13070 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 ATP6V0BQ99437 205 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 PROK2Q9HC23 129 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 ZNF407Q9C0G0 2248 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 IGHV1-24A0A0C4DH33 117 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 B4DSR2 109 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 F6UB75 175 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 GATA4P43694 442 aa10.91□□□□□ -0.66
TGFBR3-201ENST00000212355 LEPROTO15243 131 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 LYL1P12980 280 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 Q96MF0 132 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 MRPL51Q4U2R6 128 aaKnown RBP10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 CSRP1P21291 193 aaKnown RBP10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 HOXD3P31249 432 aaPredicted RBP10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 RASL10AQ92737 203 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 SNHG12Q9BXW3 62 aa10.9□□□□□ -0.66
TGFBR3-201ENST00000212355 DOPEY2Q9Y3R5 2298 aa10.9□□□□□ -0.67
TGFBR3-201ENST00000212355 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.67
TGFBR3-201ENST00000212355 F5H768 121 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 FAM110DQ8TAY7 271 aaPredicted RBP10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 RASL11AQ6T310 242 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 C9orf139Q6ZV77 190 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 COX11Q9Y6N1 276 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 THSD7BQ9C0I4 1608 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 UNQ6494/PRO21346Q6UXR6 183 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 PLEKHB2Q96CS7 222 aa10.89□□□□□ -0.67
TGFBR3-201ENST00000212355 ROS1P08922 2347 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 ZC2HC1AQ96GY0 325 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 A8MWP6 167 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 NDUFS7O75251 213 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 PMVKQ15126 192 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 DAZ1Q9NQZ3 744 aaKnown RBP10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 M0R1W7 72 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 GRNP28799 593 aaKnown RBP10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 IGLV2-23P01705 113 aa10.88□□□□□ -0.67
TGFBR3-201ENST00000212355 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms