RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 TRAV12-3A0A0B4J271 114 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 C22orf46C9J442 243 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 THBDP07204 575 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 IGHV1-8P0DP01 117 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 IGHV3-21A0A0B4J1V1 117 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 IGHG3P01860 377 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 UBE2BP63146 152 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 ZNF826PQ6ZT77 177 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 PPP1R32Q7Z5V6 425 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 ZFHX2Q9C0A1 2572 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-201ENST00000011700 USP9YO00507 2555 aaPredicted RBP4.98□□□□□ -1.61
VPS13D-201ENST00000011700 RNF224P0DH78 156 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 PRDM6Q9NQX0 595 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 KIR2DL5BA0A0G2JN68 375 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 KIR2DL5BA0A0G2JPC4 375 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 FCN3O75636 299 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 KIR2DL5AQ8N109 375 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 ANKRD29Q8N6D5 301 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 PROB1E7EW31 1015 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 CCL25O15444 150 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE2AQ6NT46 116 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 VMO1Q7Z5L0 202 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 TPRX1Q8N7U7 411 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 HS3ST6Q96QI5 342 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 LINC01565O15544 149 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 C1QCP02747 245 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 C3orf56Q8N813 242 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 V9GYY9 64 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 NDUFC1O43677 76 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 OXLD1Q5BKU9 147 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 TCTEX1D4Q5JR98 221 aa4.98□□□□□ -1.61
VPS13D-201ENST00000011700 HLA-DRB4P13762 266 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 Q8N8P6 123 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 SIGLEC9Q9Y336 463 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 HLA-DRB4X5D2U9 266 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 TPTE2P1Q5T6R2 138 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 ZNF114Q8NC26 417 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE12JA6NER3 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE7O76087 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 ZFP36L1Q07352 338 aaKnown RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 GAGE4Q13068 117 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 NDUFB1O75438 58 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 ATP6V0E2Q8NHE4 81 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 SHANK2-AS3Q9BTD1 123 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 A0A0A6YYD4 124 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 BUB1B-PAK6H3BSN5 160 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 J3KT08 172 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 CELA2BP08218 269 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 MYF5P13349 255 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 PEAR1Q5VY43 1037 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 RFLNBQ8N5W9 214 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 SMIM27A0A1W2PRY6 76 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 CDKN1BP46527 198 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 DAZ2Q13117 558 aaKnown RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 C10orf91Q5T1B1 145 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 C16orf47Q6ZP98 133 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 DAZ4Q86SG3 579 aaKnown RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 DAZ3Q9NR90 486 aaKnown RBP4.97□□□□□ -1.61
VPS13D-201ENST00000011700 IGKV3OR2-268A0A0C4DH90 116 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 PMS2P5A8MQ11 134 aa4.97□□□□□ -1.61
VPS13D-201ENST00000011700 LDLRAD4O15165 306 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 NCR2O95944 276 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 CFHR2P36980 270 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 THAP8Q8NA92 274 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 CSTL1Q9H114 145 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 LINC00311Q8N616 119 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 LINC01356Q8N9X3 169 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.61
VPS13D-201ENST00000011700 F6UB75 175 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 KLRD1Q13241 179 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 FOXE3Q13461 319 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 Q71RC1 249 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-201ENST00000011700 NPIPB5A8MRT5 1133 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 NTN3O00634 580 aaPredicted RBP4.96□□□□□ -1.62
VPS13D-201ENST00000011700 FAM104BQ5XKR9 115 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 A0A1W2PPM0 123 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 NDUFA4O00483 81 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 LMO1P25800 156 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 ZC2HC1BQ5TFG8 222 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 H0YJW9 148 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 FDCSPQ8NFU4 85 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 K7EP13 123 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 K7EP34 96 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 BTCP35070 178 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 SMIM2Q9BVW6 85 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 IGHV3-72A0A0B4J1Y9 119 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 TMEM178BH3BS89 294 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 TGFAP01135 160 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 IGHV1-2P23083 117 aa4.96□□□□□ -1.62
VPS13D-201ENST00000011700 RPP25LQ8N5L8 163 aaKnown RBP4.96□□□□□ -1.62
VPS13D-201ENST00000011700 IGHV1-3A0A0C4DH29 117 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 ZNF876PQ49A33 203 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 C5orf63A6NC05 138 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 GAGE5Q13069 117 aa4.95□□□□□ -1.62
VPS13D-201ENST00000011700 GAGE6Q13070 117 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms