RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Bmpr1bP36898 502 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Sssca1P56873 199 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ppp1cbP62141 327 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Bex6Q3TZW7 114 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fa2hQ5MPP0 372 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cypt4Q6P925 153 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 TpppQ7TQD2 218 aaKnown RBP11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr335-psQ7TRY6 312 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr195Q8VGQ6 308 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tex36Q9D5N9 219 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Col27a1Q5QNQ9 1845 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Igkv4-80A0A075B5L7 116 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm45844A0A1B0GRQ2 137 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr39E9PVX1 319 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ccl17F6R5P4 103 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm19684G3UZ45 117 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tnfsf11O35235 316 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 MidnQ3TPJ7 465 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Vwc2Q8C8N3 324 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Rab4bQ91ZR1 213 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Vkorc1Q9CRC0 161 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Atp6v1fQ9D1K2 119 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Prr15Q9D1T5 122 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 VsirQ9D659 308 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Scp2d1Q9DAH1 156 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cd200r1Q9ES57 326 aa11.23□□□□□ -0.61
Nup88-201ENSMUST00000035283 Prss32E9Q409 334 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Heatr1G3X9B1 2143 aaKnown RBP11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 SdcbpO08992 299 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 GzmfP08883 248 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Defa-rs12P50716 91 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm10775Q3V290 127 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Smim7Q5RKS2 75 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 H2-M10.3Q85ZW6 330 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Lhfpl2Q8BGA2 222 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr770Q8VGC2 311 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr126Q8VGF0 319 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 H1fooQ8VIK3 304 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Rps21Q9CQR2 83 aaKnown RBP11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gar1Q9CY66 231 aaKnown RBP11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cmtm2bQ9DAC0 210 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fstl3Q9EQC7 256 aa11.22□□□□□ -0.61
Nup88-201ENSMUST00000035283 Scgb1b15A0A087WP50 93 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Igkv5-37A0A140T8N4 115 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr1248A0A1L1SSZ5 307 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Casp16-psI6L890 176 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm20767O70517 169 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 P01674 108 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fgf7P36363 194 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gm10803Q3TZS6 135 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Xaf1Q5NBU8 273 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Plk3Q60806 631 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tox3Q80W03 575 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 AdtrpQ8C138 230 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Gpa33Q9JKA5 319 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Trav12d-1A0N8R0 115 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Nat8f7E0CYR6 227 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr1406E9Q8X1 310 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ifitm7G3X9Z2 141 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 P01790 122 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tas2r41P59532 308 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Sfrp2P97299 295 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 ApohQ01339 345 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Cd96Q3U0X8 602 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Ndufv3Q8BK30 104 aaKnown RBP11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Rab11fip5Q8R361 645 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Mob3bQ8VE04 216 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Olfr137Q8VFC2 312 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Coa3Q9D2R6 108 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Mettl9Q9EPL4 318 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Tnfrsf13bQ9ET35 249 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Kcnk5Q9JK62 502 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Fscn3Q9QXW4 498 aa11.21□□□□□ -0.61
Nup88-201ENSMUST00000035283 Wdfy4E9Q2M9 3149 aa11.21□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr912A0A1L1SSS5 310 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Esp6A8R0U0 136 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Adamts17E9Q4D1 1122 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 P06323 132 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Gm16686Q3UMN9 131 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Znf48Q3US17 591 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Trav8d-2Q5R1B6 112 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Psg17Q62056 475 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Vkorc1l1Q6TEK5 176 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr641Q8VGX6 312 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Ascl3Q9JJR7 174 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Dctn5Q9QZB9 182 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Cbln1Q9R171 193 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Sumo3Q9Z172 110 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Rgs11Q9Z2H1 443 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Lnp1A0A1B0GSK3 178 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Cldn34c4A2ANA3 212 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr918E9PVZ7 325 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Wnt2P21552 360 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Rplp1P47955 114 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Zcwpw2Q08EN7 125 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 TprkbQ8QZZ7 175 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Vmn1r26Q8R2D7 339 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 CdiptQ8VDP6 213 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Olfr124Q8VGW6 315 aa11.2□□□□□ -0.62
Nup88-201ENSMUST00000035283 Poldip2Q91VA6 368 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms