RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 FAM106AQ4KMX7 169 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 RBPMS2Q6ZRY4 209 aaKnown RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 CEND1Q8N111 149 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 CIARTQ8N365 385 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 MYOZ3Q8TDC0 251 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 FAM168AQ92567 244 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 NPIPB3Q92617 1050 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 ZNF747Q9BV97 191 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 BEX4Q9NWD9 120 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 HBDP02042 147 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 NBL1P41271 181 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 HERVK_113P61574 105 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 KLF17Q5JT82 389 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 RPP21Q9H633 154 aaKnown RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 ZNF71Q9NQZ8 489 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 PCNX3Q9H6A9 2034 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 ZNF785A8K8V0 405 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 AREGP15514 252 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 SRSF2Q01130 221 aaKnown RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 ZNF56Q15929 161 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 RPRMLQ8N4K4 120 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 FAM57AQ8TBR7 257 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 SRSF12Q8WXF0 261 aaKnown RBP4.6□□□□□ -1.67
SCARB2-218ENST00000639715 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 DUX5Q96PT3 197 aa4.6□□□□□ -1.67
SCARB2-218ENST00000639715 A0A1B0GUT8 65 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 FOXC1Q12948 553 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 ZC2HC1BQ5TFG8 222 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 FAM216BQ8N7L0 139 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 TMEM190Q8WZ59 177 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 DDB2Q92466 427 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 CACNA1BQ00975 2339 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 C17orf100A8MU93 164 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 CD69Q07108 199 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 KRTAP21-3Q3LHN1 58 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 CD177Q8N6Q3 437 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 C8orf46Q8TAG6 207 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 TM2D2Q9BX73 214 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 RPUSD1Q9UJJ7 312 aaKnown RBP4.59□□□□□ -1.67
SCARB2-218ENST00000639715 SLC25A15Q9Y619 301 aa4.59□□□□□ -1.67
SCARB2-218ENST00000639715 FER1L5A0AVI2 2057 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 LINC01549A6NIU2 74 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 LINC00473A8K010 186 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 C15orf62A8K5M9 175 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 E9PLD3 99 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 ATP5LO75964 103 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 BRI3O95415 125 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 IGKV1-39P01597 117 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 IGKV1D-39P04432 117 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 FAM27E3Q08E93 113 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 KLRB1Q12918 225 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 C2orf83Q53S99 150 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 HCP5Q6MZN7 132 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 TTTY13Q9BZ97 58 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 PTPRSQ13332 1948 aa4.59□□□□□ -1.68
SCARB2-218ENST00000639715 PEX7O00628 323 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 NPFFO15130 113 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 GFRA3O60609 400 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 IGKCP01834 107 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 ASIPP42127 132 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 SRSF1Q07955 248 aaKnown RBP eCLIP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 LGALS9BQ3B8N2 356 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 FAM201AQ5SY85 155 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 LGALS9CQ6DKI2 356 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 ATP6V0E2Q8NHE4 81 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 DNAJC30Q96LL9 226 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 ROS1P08922 2347 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 GOLGB1Q14789 3259 aaKnown RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 DPM2O94777 84 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MOSP00540 346 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 SAA1P0DJI8 122 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 LINC00694P0DN24 101 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 PMVKQ15126 192 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 CACNA1HO95180 2353 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MBD3L4A6NDZ8 208 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MBD3L3A6NE82 208 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MBD3L5A6NJ08 208 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 RHODO00212 210 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 CRXO43186 299 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 PLAUP00749 431 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 IFI27P40305 119 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 SP5Q6BEB4 398 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 LINC00305Q7Z4B0 112 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MBD3L2Q8NHZ7 208 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 NRGNQ92686 78 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MRPL20Q9BYC9 149 aaKnown RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 TRBV25-1A0A075B6N4 114 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 ZNF503-AS2A6NEH8 195 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 NDUFA3O95167 84 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 UCNP55089 124 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 PRNTQ86SH4 94 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 WIPF2Q8TF74 440 aaPredicted RBP4.58□□□□□ -1.68
SCARB2-218ENST00000639715 C11orf52Q96A22 123 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 TMEM101Q96IK0 257 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 MGST2Q99735 147 aa4.58□□□□□ -1.68
SCARB2-218ENST00000639715 IGKV1D-17A0A075B6S4 117 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 IGHV3-72A0A0B4J1Y9 119 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms