RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 KMT2EQ8IZD2 1858 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 IFITM2Q01629 132 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 K7EMI3 77 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 FAM90A2PQ658T7 463 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 LAIR2Q6ISS4 152 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 ANKRD39Q53RE8 183 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 AKAP6Q13023 2319 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 DEFB136Q30KP8 78 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 RNF166Q96A37 237 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 CEP290O15078 2479 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 SEC16AO15027 2179 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 YPEL1O60688 119 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 SAA4P35542 130 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 YPEL2Q96QA6 119 aa13.86□□□□□ -0.19
CACNA1A-253ENST00000637927 TEX48A0A1B0GUV7 120 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 ZNF883P0CG24 379 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 TIMP3P35625 211 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 EFNB3Q15768 340 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 IGKV1D-12P01611 117 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 C1QTNF4Q9BXJ3 329 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 FBLIM1Q8WUP2 373 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 TMEM242Q9NWH2 141 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 WFDC9Q8NEX5 89 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 IGKV1D-8A0A087WSZ0 117 aa13.85□□□□□ -0.19
CACNA1A-253ENST00000637927 NBL1P41271 181 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 WFDC1Q9HC57 220 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 LCTP09848 1927 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 A0A1B0GTI1 187 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 B4DSR2 109 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 E9PLN8 166 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 PVRIGQ6DKI7 326 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 AMN1Q8IY45 258 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 TMEM170AQ8WVE7 144 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 CHCHD1Q96BP2 118 aaKnown RBP13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 CABIN1Q9Y6J0 2220 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 C8orf31Q8N9H6 132 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 IGKV1-9A0A0C4DH69 117 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 TRACP01848 142 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 STPG4Q8N801 248 aa13.84□□□□□ -0.19
CACNA1A-253ENST00000637927 TRBV25-1A0A075B6N4 114 aa13.83□□□□□ -0.19
CACNA1A-253ENST00000637927 COL4A6Q14031 1691 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 IGHG4P01861 327 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 FAM90A1Q86YD7 464 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 VCYO14598 125 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 ID3Q02535 119 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 ARTNQ5T4W7 220 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 TRBV6-7A0A0A0MS04 114 aa13.83□□□□□ -0.2
CACNA1A-253ENST00000637927 NDUFS8O00217 210 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 LINC01619G3V211 115 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 CHAC1Q9BUX1 264 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 NOP10Q9NPE3 64 aaKnown RBP13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 CADP27708 2225 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 CD177Q8N6Q3 437 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 NR2C2APQ86WQ0 139 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 RALGAPA2Q2PPJ7 1873 aa13.82□□□□□ -0.2
CACNA1A-253ENST00000637927 RNASE2P10153 161 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 DNAJC30Q96LL9 226 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 EFNA4P52798 201 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 ATRAIDQ6UW56 229 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 CTSGP08311 255 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 MYMXA0A1B0GTQ4 84 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 C5orf63A6NC05 138 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 F8W735 103 aaPredicted RBP13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 HGFACQ04756 655 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 G3V318 75 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 DUTP33316 252 aaKnown RBP13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 DTX1Q86Y01 620 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 ZNF581Q9P0T4 197 aa13.81□□□□□ -0.2
CACNA1A-253ENST00000637927 SOCS3O14543 225 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 IGHV1-8P0DP01 117 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 CCL20P78556 96 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 C4orf48Q5BLP8 95 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 ALPK2Q86TB3 2170 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 TP53TG1Q9Y2A0 90 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 TMEM178BH3BS89 294 aa13.8□□□□□ -0.2
CACNA1A-253ENST00000637927 LINC00479Q96M42 142 aa13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 RNF126Q9BV68 326 aa13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 KLHDC3Q9BQ90 382 aa13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 BUB3O43684 328 aa13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 IGFBP3P17936 291 aaPredicted RBP13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 SUPT4H1P63272 117 aaKnown RBP13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 F2Z2F3 143 aa13.79□□□□□ -0.2
CACNA1A-253ENST00000637927 ZFP36L1Q07352 338 aaKnown RBP13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 GGNQ86UU5 652 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 KIAA2026Q5HYC2 2103 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 SCN10AQ9Y5Y9 1956 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 APRG1Q8IVJ8 170 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 CACNA1IQ9P0X4 2223 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 TNFSF13O75888 250 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 TRBV7-1A0A0A6YYK4 115 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 TMEM213A2RRL7 107 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 RNF222A6NCQ9 220 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 DOPEY2Q9Y3R5 2298 aa13.78□□□□□ -0.2
CACNA1A-253ENST00000637927 TIRAPP58753 221 aa13.77□□□□□ -0.2
CACNA1A-253ENST00000637927 IGKV1-27A0A075B6S5 117 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms