RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ARL6Q9H0F7 186 aa13.25□□□□□ -0.29
SMN2-215ENST00000628696 NOP10Q9NPE3 64 aaKnown RBP13.25□□□□□ -0.29
SMN2-215ENST00000628696 A0A087X0K7 114 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 ADAP1O75689 374 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 PLP1P60201 277 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 SELENOTP62341 195 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 ID3Q02535 119 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 OR5I1Q13606 314 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
SMN2-215ENST00000628696 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
SMN2-215ENST00000628696 SSSCA1O60232 199 aa13.23□□□□□ -0.29
SMN2-215ENST00000628696 CCNKO75909 580 aa13.23□□□□□ -0.29
SMN2-215ENST00000628696 SNRPCP09234 159 aaKnown RBP13.23□□□□□ -0.29
SMN2-215ENST00000628696 CDKN1BP46527 198 aa13.23□□□□□ -0.29
SMN2-215ENST00000628696 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
SMN2-215ENST00000628696 Q9H8V8 135 aa13.23□□□□□ -0.29
SMN2-215ENST00000628696 PMS2P5A8MQ11 134 aa13.22□□□□□ -0.29
SMN2-215ENST00000628696 METTL15P1P0C7V9 234 aa13.22□□□□□ -0.29
SMN2-215ENST00000628696 TMEM263Q8WUH6 116 aaKnown RBP13.22□□□□□ -0.29
SMN2-215ENST00000628696 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
SMN2-215ENST00000628696 NPVFQ9HCQ7 196 aa13.22□□□□□ -0.29
SMN2-215ENST00000628696 V9GYH0 126 aa13.22□□□□□ -0.29
SMN2-215ENST00000628696 C9orf170A2RU37 121 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 SLC38A11Q08AI6 406 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 PATE2Q6UY27 113 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 SPATA12Q7Z6I5 190 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 OR10J6PQ8NGY7 276 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 RNASE8Q8TDE3 154 aaKnown RBP13.21□□□□□ -0.29
SMN2-215ENST00000628696 SMIM8Q96KF7 97 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 ARV1Q9H2C2 271 aa13.21□□□□□ -0.29
SMN2-215ENST00000628696 LRP1BQ9NZR2 4599 aa13.21□□□□□ -0.3
SMN2-215ENST00000628696 TRAV26-1A0A087WT03 109 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 A0A0J9YY99 117 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 H7BYZ3 331 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 SCGB1D2O95969 90 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 UBE2MP61081 183 aaKnown RBP13.2□□□□□ -0.3
SMN2-215ENST00000628696 DLK1P80370 383 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 DEDD2Q8WXF8 326 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
SMN2-215ENST00000628696 MGAT4CQ9UBM8 478 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 RNF24Q9Y225 148 aa13.2□□□□□ -0.3
SMN2-215ENST00000628696 GOSR2O14653 212 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
SMN2-215ENST00000628696 S100A5P33763 92 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 TEPPQ6URK8 271 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 LCN15Q6UWW0 184 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 CCDC190Q86UF4 302 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 OR10P1Q8NGE3 313 aa13.19□□□□□ -0.3
SMN2-215ENST00000628696 GAGE12BA1L429 117 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 H3BTX0 84 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 GAGE7O76087 117 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 GAGE12FP0CL80 117 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 GAGE12GP0CL81 117 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 GAGE12IP0CL82 117 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 M6PRP20645 277 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 LINC00305Q7Z4B0 112 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 RXFP4Q8TDU9 374 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
SMN2-215ENST00000628696 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
SMN2-215ENST00000628696 J3KRW8 73 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
SMN2-215ENST00000628696 CXCL2P19875 107 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 TTC32Q5I0X7 151 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 C20orf144Q9BQM9 153 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 KRTAP1-5Q9BYS1 174 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 FLVCR2Q9UPI3 526 aa13.17□□□□□ -0.3
SMN2-215ENST00000628696 SNURFLB1AK76 121 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 PRAC2D3DTV9 90 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 K7EPK0 472 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 RLN2P04090 185 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 INPP1P49441 399 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 ESRGQ1W209 222 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 PXDC1Q5TGL8 231 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 GFI1BQ5VTD9 330 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 ZNF546Q86UE3 836 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 BPIFA4PQ86YQ2 179 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 GSKIPQ9P0R6 139 aa13.16□□□□□ -0.3
SMN2-215ENST00000628696 AGPAT2O15120 278 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 COX7A2P2O60397 106 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 HOXA5P20719 270 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 Q8N1X5 172 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 ZNF503Q96F45 646 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 SCRT2Q9NQ03 307 aa13.15□□□□□ -0.3
SMN2-215ENST00000628696 CCDC160A6NGH7 325 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 SLC17A3O00476 420 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 NDUFB6O95139 128 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 OR4E1P0C645 316 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 ARL16Q0P5N6 197 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 IAH1Q2TAA2 248 aaPredicted RBP13.14□□□□□ -0.31
SMN2-215ENST00000628696 C4orf46Q504U0 113 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 Q9H3A6 140 aa13.14□□□□□ -0.31
SMN2-215ENST00000628696 TRAV12-3A0A0B4J271 114 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 LINC00854A0A1B0GVQ3 168 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 TSC22D2O75157 780 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 KRTAP10-2P60368 255 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms