RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ZNF331Q9NQX6 463 aaPredicted RBP15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 MYO18BQ8IUG5 2567 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 IGHV4-38-2P0DP08 117 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 RPL7P18124 248 aaKnown RBP15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 GPR183P32249 361 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 PRNTQ86SH4 94 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 TP53TG3Q9ULZ0 132 aa15.35■□□□□ 0.05
PCDHB11-202ENST00000624887 HIGD1CA8MV81 97 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 K7EQM0 130 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 BMPR1BO00238 502 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 NUPR1O60356 82 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 P01737 135 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 Q0VG73 95 aa15.34■□□□□ 0.05
PCDHB11-202ENST00000624887 CLEC3BP05452 202 aa15.33■□□□□ 0.05
PCDHB11-202ENST00000624887 S100A7P31151 101 aa15.33■□□□□ 0.05
PCDHB11-202ENST00000624887 DSCR9P59020 149 aa15.33■□□□□ 0.05
PCDHB11-202ENST00000624887 NUTF2P61970 127 aaKnown RBP15.33■□□□□ 0.05
PCDHB11-202ENST00000624887 DAZAP1Q96EP5 407 aaKnown RBP15.33■□□□□ 0.05
PCDHB11-202ENST00000624887 A8MWL6 223 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 DIRC3C9JPN6 131 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 NPIPB6E9PJ23 425 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 CRIP2P52943 208 aaPredicted RBP15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 IQCJQ1A5X6 159 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 CIARTQ8N365 385 aaPredicted RBP15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 AAMDCQ9H7C9 122 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 ZFP30Q9Y2G7 519 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 SPG11Q96JI7 2443 aa15.33■□□□□ 0.04
PCDHB11-202ENST00000624887 ESDP10768 282 aa15.32■□□□□ 0.04
PCDHB11-202ENST00000624887 PSG3Q16557 428 aa15.32■□□□□ 0.04
PCDHB11-202ENST00000624887 C19orf54Q5BKX5 351 aa15.32■□□□□ 0.04
PCDHB11-202ENST00000624887 TOMM20LQ6UXN7 152 aa15.32■□□□□ 0.04
PCDHB11-202ENST00000624887 CCDC140Q96MF4 163 aa15.32■□□□□ 0.04
PCDHB11-202ENST00000624887 LINC00310P59036 64 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 PSG9Q00887 426 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 ATP5L2Q7Z4Y8 100 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 MRPL52Q86TS9 123 aaKnown RBP15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 NRGNQ92686 78 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 EEF1AKMT3Q96AZ1 226 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 ZFAND3Q9H8U3 227 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 PSG8Q9UQ74 426 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 TRBV7-1A0A0A6YYK4 115 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 B4DSR2 109 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 M0R3E3 92 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 GFRA4Q9GZZ7 299 aa15.31■□□□□ 0.04
PCDHB11-202ENST00000624887 TRAV41A0A0B4J266 112 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 IGHV3-35A0A0C4DH35 117 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 TCAPO15273 167 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 APCSP02743 223 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 KIAA1644Q3SXP7 199 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 ARL6IP6Q8N6S5 226 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 MS4A10Q96PG2 267 aa15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 KMT2BQ9UMN6 2715 aaPredicted RBP15.3■□□□□ 0.04
PCDHB11-202ENST00000624887 KIR2DL5BA0A0G2JN68 375 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 KIR2DL5BA0A0G2JPC4 375 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 SERF1AO75920 110 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 COL8A1P27658 744 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 OR10J3Q5JRS4 329 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 CLEC19AQ6UXS0 136 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 TCF24Q7RTU0 167 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 BAGE3Q86Y29 109 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 KIR2DL5AQ8N109 375 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 OR4B1Q8NGF8 309 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 GNB4Q9HAV0 340 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 HIF1ANQ9NWT6 349 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 SMAD5-AS1Q9Y6J3 95 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 SERTM2A0A1B0GWG4 89 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 A0A1B0GXF2 115 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 FAM231BA6NCW3 169 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 ZNF785A8K8V0 405 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 CSN1S1P47710 185 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 C16orf54Q6UWD8 224 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 Q71RC1 249 aaPredicted RBP15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 GTSF1Q8WW33 167 aa15.29■□□□□ 0.04
PCDHB11-202ENST00000624887 ZNF253O75346 499 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 PLA2G2AP14555 144 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 RAB9AP51151 201 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 SLAQ13239 276 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 GDF5OSQ5U4N7 250 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 ZC2HC1AQ96GY0 325 aa15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 SOX21Q9Y651 276 aaPredicted RBP15.28■□□□□ 0.04
PCDHB11-202ENST00000624887 IGHV3OR16-8A0A075B7F1 116 aa15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 F2Z2F3 143 aa15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 SLC25A16P16260 332 aa15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 PAFAH1B2P68402 229 aa15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 ATP6V0BQ99437 205 aa15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 UTP20O75691 2785 aaKnown RBP15.27■□□□□ 0.04
PCDHB11-202ENST00000624887 A6NDX4 124 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 EREGO14944 169 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 IGF1P05019 195 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 GATA3P23771 443 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 SRIP30626 198 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 ATP5G2Q06055 141 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 C1orf194Q5T5A4 169 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 ZFHX3Q15911 3703 aa15.27■□□□□ 0.03
PCDHB11-202ENST00000624887 FAM223BA6NKX1 122 aa15.26■□□□□ 0.03
PCDHB11-202ENST00000624887 H3BUX3 64 aa15.26■□□□□ 0.03
PCDHB11-202ENST00000624887 BUB3O43684 328 aa15.26■□□□□ 0.03
PCDHB11-202ENST00000624887 TPPP2P59282 170 aa15.26■□□□□ 0.03
PCDHB11-202ENST00000624887 RBPMS2Q6ZRY4 209 aaKnown RBP15.26■□□□□ 0.03
PCDHB11-202ENST00000624887 FAM223AQ8IWN6 122 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms