RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OVOL1O14753 267 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 RPL7P18124 248 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 BMI1P35226 326 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 C16orf54Q6UWD8 224 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 TUBA4BQ9H853 241 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 SMCO4Q9NRQ5 59 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 TMEM14CQ9P0S9 112 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 VAX2Q9UIW0 290 aa13.54□□□□□ -0.24
PTCHD3-202ENST00000622555 CHEK1O14757 476 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 SNRPCP09234 159 aaKnown RBP13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 CBLN1P23435 193 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 RHEBQ15382 184 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 GPR82Q96P67 336 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 ELOVL1Q9BW60 279 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 COL6A5A8TX70 2615 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 M0QZ24 198 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 IFNA1P01562 189 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 FOLR2P14207 255 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 PSMB3P49720 205 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 CYB561D1Q8N8Q1 229 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 GLMPQ8WWB7 406 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 FXYD5Q96DB9 178 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 TMEM167BQ9NRX6 74 aa13.53□□□□□ -0.24
PTCHD3-202ENST00000622555 MRPS12O15235 138 aaKnown RBP13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 TAGLN2P37802 199 aaKnown RBP13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 GALR1P47211 349 aa13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 FAM90A2PQ658T7 463 aa13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 SHISA2Q6UWI4 295 aa13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 SELENOKQ9Y6D0 94 aa13.52□□□□□ -0.25
PTCHD3-202ENST00000622555 STAB1Q9NY15 2570 aa13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 COLCA2A8K830 154 aa13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 CSN3P07498 182 aa13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 HIST1H1EP10412 219 aaKnown RBP13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 ATF4P18848 351 aaPredicted RBP13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 SIGLEC15Q6ZMC9 328 aa13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 BLNKQ8WV28 456 aa13.51□□□□□ -0.25
PTCHD3-202ENST00000622555 ZNF785A8K8V0 405 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 H3BQ15 152 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 H3BTX0 84 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 NBEAP1P0C6P0 100 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 ADAMTSL5Q6ZMM2 481 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 RPS10P5Q9NQ39 176 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 SMAD5-AS1Q9Y6J3 95 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 M0R036 132 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 UBE2G2P60604 165 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 C15orf54Q8N8G6 183 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 LINC00482Q8N8I6 264 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 ZNF586Q9NXT0 402 aa13.5□□□□□ -0.25
PTCHD3-202ENST00000622555 HELTA6NFD8 242 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 CD81P60033 236 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 RPL11P62913 178 aaKnown RBP13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 TCF24Q7RTU0 167 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 DYNLRB2Q8TF09 96 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 MANBALQ9NQG1 85 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 MLXQ9UH92 298 aa13.49□□□□□ -0.25
PTCHD3-202ENST00000622555 PAGE4O60829 102 aa13.48□□□□□ -0.25
PTCHD3-202ENST00000622555 C17orf77Q96MU5 243 aa13.48□□□□□ -0.25
PTCHD3-202ENST00000622555 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 AKR1C3P42330 323 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 TVP23CQ96ET8 276 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 IGKV3-7A0A075B6H7 116 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 A0A087WWC5 75 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 A0A087X0K7 114 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 MEF2BQ02080 365 aaPredicted RBP13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 CST9LP1Q5W188 147 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 NIPSNAP3BQ9BS92 247 aa13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 YTHDF2Q9Y5A9 579 aaKnown RBP13.47□□□□□ -0.25
PTCHD3-202ENST00000622555 TMEM250H0YL14 139 aa13.46□□□□□ -0.25
PTCHD3-202ENST00000622555 RANP62826 216 aaKnown RBP13.46□□□□□ -0.25
PTCHD3-202ENST00000622555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.46□□□□□ -0.25
PTCHD3-202ENST00000622555 YPEL4Q96NS1 127 aa13.46□□□□□ -0.25
PTCHD3-202ENST00000622555 SLC17A3O00476 420 aa13.45□□□□□ -0.26
PTCHD3-202ENST00000622555 SAP30O75446 220 aa13.45□□□□□ -0.26
PTCHD3-202ENST00000622555 NDUFB4O95168 129 aa13.45□□□□□ -0.26
PTCHD3-202ENST00000622555 MDFIQ99750 246 aa13.45□□□□□ -0.26
PTCHD3-202ENST00000622555 SIGLEC8Q9NYZ4 499 aa13.45□□□□□ -0.26
PTCHD3-202ENST00000622555 A0A1W2PRE2 83 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 B4DEV8 164 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 MEOX2P50222 304 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 PDE6HQ13956 83 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 HIST1H2BAQ96A08 127 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 SDF2L1Q9HCN8 221 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 NRN1Q9NPD7 142 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 ARL2-SNX15V9GYD0 113 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 ATP5G3P48201 142 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 CEBPGP53567 150 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 PNRC1Q12796 327 aaPredicted RBP13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 DEFB114Q30KQ6 69 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 RNF212Q495C1 297 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 GBGT1Q8N5D6 347 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 Q9H3A6 140 aa13.44□□□□□ -0.26
PTCHD3-202ENST00000622555 C11orf94C9JXX5 98 aa13.43□□□□□ -0.26
PTCHD3-202ENST00000622555 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
PTCHD3-202ENST00000622555 RIPPLY3P57055 190 aa13.43□□□□□ -0.26
PTCHD3-202ENST00000622555 GGTLC3B5MD39 225 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 ZNF253O75346 499 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 PSG9Q00887 426 aa13.42□□□□□ -0.26
PTCHD3-202ENST00000622555 FLI1Q01543 452 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms