RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 ROBO1Q9Y6N7 1651 aa2.34□□□□□ -2.03
LRRC39-204ENST00000620882 CACNA1DQ01668 2161 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 CCDC18Q5T9S5 1454 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 WDR90Q96KV7 1748 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 IGKV1OR2-108A0A075B7D4 117 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV3-21A0A0B4J1V1 117 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 GRIFINA4D1Z8 144 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 COLCA2A8K830 154 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 H3BMM0 161 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF737O75373 536 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 IL7P13232 177 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 NPPCP23582 126 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 UBE2WQ96B02 151 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 CHCHD7Q9BUK0 85 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 RERGLQ9H628 205 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 SLC39A9Q9NUM3 307 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 HHLA3Q9XRX5 114 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 MPC1Q9Y5U8 109 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 V9GYS6 101 aa2.34□□□□□ -2.04
LRRC39-204ENST00000620882 COL1A1P02452 1464 aaPredicted RBP2.33□□□□□ -2.04
LRRC39-204ENST00000620882 DLC1Q96QB1 1528 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 MUC4Q99102 2169 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 MED1Q15648 1581 aaPredicted RBP2.33□□□□□ -2.04
LRRC39-204ENST00000620882 C17orf51A8MQB3 221 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 A8MWL6 223 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 K7EM74 188 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 RER1O15258 196 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 LY6HO94772 140 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 SHBGP04278 402 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 IFITM1P13164 125 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 DYNLT1P63172 113 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 TDRG1Q3Y452 100 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 SPANXN3Q5MJ09 141 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF880Q6PDB4 577 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 Q6ZUT4 128 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 LINC00052Q96N35 136 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 BCL2L10Q9HD36 194 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 TXNL4BQ9NX01 149 aaKnown RBP2.33□□□□□ -2.04
LRRC39-204ENST00000620882 CHCHD2Q9Y6H1 151 aaPredicted RBP2.33□□□□□ -2.04
LRRC39-204ENST00000620882 RIMBP3CA6NJZ7 1639 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 RIMBP3BA6NNM3 1639 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 CC2D2AQ9P2K1 1620 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 RIMBP3Q9UFD9 1639 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 USP24Q9UPU5 2620 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 MICAL3Q7RTP6 2002 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 SCN3AQ9NY46 2000 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 PLXNA3P51805 1871 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 EML5Q05BV3 1969 aa2.33□□□□□ -2.04
LRRC39-204ENST00000620882 H3BT86 120 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 NDUFB3O43676 98 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HIST1H2BKO60814 126 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 WISP3O95389 354 aaPredicted RBP2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HRASP01112 189 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 TNFP01375 233 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV3-7P01780 117 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HIST1H2BJP06899 126 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 SLC25A4P12235 298 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 AKR1C2P52895 323 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 TMEM258P61165 79 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 CDK5R1Q15078 307 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 Q5BKY6 102 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 C9orf153Q5TBE3 101 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF705AQ6ZN79 300 aaPredicted RBP2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HIST3H2BBQ8N257 126 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 CNEP1R1Q8N9A8 125 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 OR10P1Q8NGE3 313 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 OR10AC1Q8NH08 325 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 DUSP21Q9H596 190 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 RPRMQ9NS64 109 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 LINC00312Q9Y6C7 94 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 ABCA3Q99758 1704 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 TRPM3Q9HCF6 1732 aaPredicted RBP2.32□□□□□ -2.04
LRRC39-204ENST00000620882 KIDINS220Q9ULH0 1771 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 KIAA2026Q5HYC2 2103 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 LRRIQ1Q96JM4 1722 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 IGKV1D-37A0A075B6S9 117 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 A0A0B4J2C4 111 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 A0A1W2PRS3 328 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 C7orf66A4D0T2 115 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 A8MU10 97 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 UQCRQO14949 82 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 SLC25A20O43772 301 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HBDP02042 147 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 IGLC1P0CG04 106 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV3-30-3P0DP02 117 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 CRYGAP11844 174 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF22P17026 224 aaPredicted RBP2.32□□□□□ -2.04
LRRC39-204ENST00000620882 NUDT2P50583 147 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF90Q03938 601 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 C10orf91Q5T1B1 145 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 UNQ5815/PRO19632Q6UWF5 114 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 C2orf91Q6ZV80 131 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 MIR17HGQ75NE6 70 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 OTOSQ8NHW6 89 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 UBALD1Q8TB05 177 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 HIST1H2BLQ99880 126 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 NPVFQ9HCQ7 196 aa2.32□□□□□ -2.04
LRRC39-204ENST00000620882 TRAV12-2A0A075B6T6 113 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms