RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 BPESC1Q9GZL8 116 aa9.71□□□□□ -0.85
SRRT-216ENST00000618262 MRPL18Q9H0U6 180 aaKnown RBP9.71□□□□□ -0.85
SRRT-216ENST00000618262 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.85
SRRT-216ENST00000618262 KCNS2Q9ULS6 477 aa9.71□□□□□ -0.85
SRRT-216ENST00000618262 SRD5A1P18405 259 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 TAL2Q16559 108 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 C1orf195Q5TG92 126 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 CD177Q8N6Q3 437 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 GVQW1Q8N7I0 195 aa9.71□□□□□ -0.86
SRRT-216ENST00000618262 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
SRRT-216ENST00000618262 IGKV1D-17A0A075B6S4 117 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 TMEM50BP56557 158 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 QRFPP83859 136 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 GAGE2BQ13066 116 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 GAGE2EQ4V326 116 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 HAPLN4Q86UW8 402 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 DTX2Q86UW9 622 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 SGMS2Q8NHU3 365 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 ARPC1AQ92747 370 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 BEX4Q9NWD9 120 aaPredicted RBP9.7□□□□□ -0.86
SRRT-216ENST00000618262 GAGE2DQ9UEU5 116 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 CEBPZOSA8MTT3 80 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 ZNF737O75373 536 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 AMY2BP19961 511 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 ACP7Q6ZNF0 438 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 H1FXQ92522 213 aaKnown RBP9.7□□□□□ -0.86
SRRT-216ENST00000618262 GNB4Q9HAV0 340 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 ARL2-SNX15V9GYD0 113 aa9.7□□□□□ -0.86
SRRT-216ENST00000618262 LRRC30A6NM36 301 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 TMEM14DPA8MWL7 114 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 TMEM178BH3BS89 294 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 LINC00336Q6ZUF6 198 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 RAI1Q7Z5J4 1906 aaPredicted RBP9.69□□□□□ -0.86
SRRT-216ENST00000618262 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.69□□□□□ -0.866e-7■■■□□ 19
SRRT-216ENST00000618262 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A9PA6NNJ1 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 LGALS4P56470 323 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
SRRT-216ENST00000618262 ARFRP1Q13795 201 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 SAMD5Q5TGI4 173 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 HOGA1Q86XE5 327 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 RFESDQ8TAC1 157 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 LINC01587Q99440 93 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 MTORP42345 2549 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 IGHV4-30-2A0A087WSY4 118 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 PI3P19957 117 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 VWC2Q2TAL6 325 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 TMEM219Q86XT9 240 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 SIGLEC8Q9NYZ4 499 aa9.69□□□□□ -0.86
SRRT-216ENST00000618262 TEP1Q99973 2627 aaKnown RBP9.68□□□□□ -0.86
SRRT-216ENST00000618262 SRRM5B3KS81 715 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FCGR3BO75015 233 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 CBLN1P23435 193 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FGF12P61328 243 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 TESK1Q15569 626 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 C20orf204Q6ZNR8 217 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 TMEM230Q96A57 120 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 KIR2DL4Q99706 377 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A7PA6NKC0 464 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A22PA8MWA6 464 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A12PA8MX19 464 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FAM90A23PA8MXZ1 464 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 CXorf1O96002 111 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 EFNA4P52798 201 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 BPIFA4PQ86YQ2 179 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 Q96M66 194 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 SLC25A39Q9BZJ4 359 aaPredicted RBP9.68□□□□□ -0.86
SRRT-216ENST00000618262 ZNF665Q9H7R5 613 aa9.68□□□□□ -0.86
SRRT-216ENST00000618262 FAM236DA0A1B0GTK5 79 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 FAM236CP0DP71 79 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 UBE2G1P62253 170 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 IL1F10Q8WWZ1 152 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 IGFBPL1Q8WX77 278 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 SCGB3A2Q96PL1 93 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 SCRT2Q9NQ03 307 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 CTSZQ9UBR2 303 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 ABCA1O95477 2261 aa9.67□□□□□ -0.86
SRRT-216ENST00000618262 CYSRT1A8MQ03 144 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 OVOL3O00110 214 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 SUPT4H1P63272 117 aaKnown RBP9.66□□□□□ -0.86
SRRT-216ENST00000618262 SLC38A11Q08AI6 406 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 C5orf66Q9H5L9 145 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 MAST4O15021 2626 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 SH2D7A6NKC9 451 aaPredicted RBP9.66□□□□□ -0.86
SRRT-216ENST00000618262 APOMO95445 188 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 LHBP01229 141 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 KIR3DL3Q8N743 410 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 WFDC11Q8NEX6 87 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 LEAP2Q969E1 77 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 A0A1W2PRF3 423 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 A0A1W2PRM7 423 aa9.66□□□□□ -0.86
SRRT-216ENST00000618262 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms