RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SIGLEC9Q9Y336 463 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 LYNX1G3V0Z9 82 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 LYNX1P0DP58 116 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 COX6B1P14854 86 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 IGKV1D-17A0A075B6S4 117 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 LTBRP36941 435 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 S100A7L2Q5SY68 101 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 BVES-AS1Q5T3Y7 98 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 ZNF114Q8NC26 417 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 EDA2RQ9HAV5 297 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 PKDREJQ9NTG1 2253 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 TRAV8-3A0A0A6YYJ7 113 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 SRRM4A7MD48 611 aaKnown RBP8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 CFHR2P36980 270 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 SHANK2-AS3Q9BTD1 123 aa8.66□□□□□ -1.02
CLTCL1-209ENST00000617103 ADARB2-AS1A8MUL3 147 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 IGKV1-16P04430 117 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 LGALS9BQ3B8N2 356 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 LGALS9CQ6DKI2 356 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 ZNF474Q6S9Z5 364 aaPredicted RBP8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 IGHV1-24A0A0C4DH33 117 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 SMIM27A0A1W2PRY6 76 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 WNT2P09544 360 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 MALP21145 153 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 CCL19Q99731 98 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 TMEM213A2RRL7 107 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 GATD1Q8NB37 220 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 C11orf52Q96A22 123 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 TMEM14BQ9NUH8 114 aa8.65□□□□□ -1.02
CLTCL1-209ENST00000617103 KIR2DL5BA0A0G2JN68 375 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 KIR2DL5BA0A0G2JPC4 375 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 OOSP1A8MZH6 123 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 IGKV1-39P01597 117 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 IGKV1D-39P04432 117 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 C5orf64Q2M2E5 130 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 SPACA3Q8IXA5 215 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 KIR2DL5AQ8N109 375 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 RASL10AQ92737 203 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 ANK1P16157 1881 aa8.65□□□□□ -1.03
CLTCL1-209ENST00000617103 A0A1W2PPM0 123 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 TMEM178BH3BS89 294 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 LCNL1Q6ZST4 164 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 TRAV41A0A0B4J266 112 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 PRSS46E5RG02 174 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 NTN3O00634 580 aaPredicted RBP8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 B3GALT5-AS1P59052 145 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 TMEM75Q8N9X5 138 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 FAM168AQ92567 244 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 OVOL2Q9BRP0 275 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 SHANK1Q9Y566 2161 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 MYMXA0A1B0GTQ4 84 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 TIMM21Q9BVV7 248 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 PAX4O43316 350 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 NEGR1Q7Z3B1 354 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 STHQ8IWL8 128 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 WFDC12Q8WWY7 111 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 ATP6V0BQ99437 205 aa8.64□□□□□ -1.03
CLTCL1-209ENST00000617103 CDKN1BP46527 198 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 ARTNQ5T4W7 220 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 SRD5A1P18405 259 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 LMO1P25800 156 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 LY6G5BQ8NDX9 201 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 SRSF8Q9BRL6 282 aaKnown RBP8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 CHCHD5Q9BSY4 110 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 TRGV4A0A0C4DH28 118 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 A0A1W2PPI3 338 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 ACACAQ13085 2346 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 HAPLN4Q86UW8 402 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 Q8N8P6 123 aa8.63□□□□□ -1.03
CLTCL1-209ENST00000617103 NCOR1O75376 2440 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 ETV2O00321 342 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 PF4P02776 101 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 H3BMM0 161 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 THBDP07204 575 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 MINOS1Q5TGZ0 78 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 PHLDA1Q8WV24 401 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 UBE2WQ96B02 151 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 LINC00527Q9UJ94 153 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 MINOS1-NBL1R4GNA1 71 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 BUB1B-PAK6H3BSN5 160 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 PRSS57Q6UWY2 283 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 C2orf66Q6UXQ4 117 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 ZNF48Q96MX3 618 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 RCHY1Q96PM5 261 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 PYGO2Q9BRQ0 406 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 TRBV7-1A0A0A6YYK4 115 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 ZNF672Q499Z4 452 aaPredicted RBP8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 JPT2Q9H910 190 aa8.62□□□□□ -1.03
CLTCL1-209ENST00000617103 SCN5AQ14524 2016 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms