RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 MAJINQ3KP22 176 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 C16orf54Q6UWD8 224 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 BCL6BQ8N143 479 aaPredicted RBP13.53□□□□□ -0.24
NEK3-206ENST00000611833 DYNAPQ8N1N2 210 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 CHCHD1Q96BP2 118 aaKnown RBP13.53□□□□□ -0.24
NEK3-206ENST00000611833 AAMDCQ9H7C9 122 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.53□□□□□ -0.24
NEK3-206ENST00000611833 A0A1W2PPR1 153 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 SH2D7A6NKC9 451 aaPredicted RBP13.53□□□□□ -0.24
NEK3-206ENST00000611833 M0R3E3 92 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 NDFIP1Q9BT67 221 aa13.53□□□□□ -0.24
NEK3-206ENST00000611833 A0A1B0GUT8 65 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 ZNF785A8K8V0 405 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 HNRNPA3P51991 378 aaKnown RBP13.52□□□□□ -0.24
NEK3-206ENST00000611833 TTC9CQ8N5M4 171 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 TMEM70Q9BUB7 260 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 C21orf62Q9NYP8 219 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 THYN1Q9P016 225 aa13.52□□□□□ -0.24
NEK3-206ENST00000611833 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
NEK3-206ENST00000611833 LINC00614P0C842 121 aa13.52□□□□□ -0.25
NEK3-206ENST00000611833 NDPQ00604 133 aa13.52□□□□□ -0.25
NEK3-206ENST00000611833 DTX2Q86UW9 622 aa13.52□□□□□ -0.25
NEK3-206ENST00000611833 TRAV9-2A0A087WT02 112 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 IGHV3-23P01764 117 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 NHLH1Q02575 133 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 RIGQ13278 110 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 PDE6HQ13956 83 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 C1orf122Q6ZSJ8 110 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 ZNF48Q96MX3 618 aaPredicted RBP13.51□□□□□ -0.25
NEK3-206ENST00000611833 IGHV1-24A0A0C4DH33 117 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 ARMS2P0C7Q2 107 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 CT45A10P0DMU9 189 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 TMEM11P17152 192 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
NEK3-206ENST00000611833 CSN1S1P47710 185 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 TPPP3Q9BW30 176 aa13.51□□□□□ -0.25
NEK3-206ENST00000611833 COL6A6A6NMZ7 2263 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 OOSP1A8MZH6 123 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 NDUFS7O75251 213 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 NDUFB8O95169 186 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
NEK3-206ENST00000611833 LEPROTL1O95214 131 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 CRIP1P50238 77 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 COL5A1-AS1Q5SY13 56 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 MINOS1Q5TGZ0 78 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 LPAR2Q9HBW0 351 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 MINOS1-NBL1R4GNA1 71 aa13.5□□□□□ -0.25
NEK3-206ENST00000611833 ASH1LQ9NR48 2969 aaKnown RBP13.5□□□□□ -0.25
NEK3-206ENST00000611833 OR2T8A6NH00 312 aa13.49□□□□□ -0.25
NEK3-206ENST00000611833 FAM120AOSQ5T036 256 aa13.49□□□□□ -0.25
NEK3-206ENST00000611833 C8orf49Q96NF6 230 aa13.49□□□□□ -0.25
NEK3-206ENST00000611833 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 ZNF138P52744 262 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 PSG9Q00887 426 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 Q8N6K4 173 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 C20orf202A1L168 122 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 SPATA12Q7Z6I5 190 aa13.48□□□□□ -0.25
NEK3-206ENST00000611833 OVOL3O00110 214 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 CSN3P07498 182 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 RPL7P18124 248 aaKnown RBP13.47□□□□□ -0.25
NEK3-206ENST00000611833 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 A0A1B0GW15 77 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 EBI3Q14213 229 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 Q6AWC8 147 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 LINC00173Q6ZV60 143 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 TMEM208Q9BTX3 173 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 SVEP1Q4LDE5 3571 aa13.47□□□□□ -0.25
NEK3-206ENST00000611833 SERTM2A0A1B0GWG4 89 aa13.46□□□□□ -0.25
NEK3-206ENST00000611833 SYS1-DBNDD2H3BUS1 97 aa13.46□□□□□ -0.25
NEK3-206ENST00000611833 IGLL1P15814 213 aa13.46□□□□□ -0.25
NEK3-206ENST00000611833 TFPI2P48307 235 aa13.46□□□□□ -0.25
NEK3-206ENST00000611833 C1RLQ9NZP8 487 aa13.46□□□□□ -0.25
NEK3-206ENST00000611833 IGHV7-81A0A0B4J1V7 117 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 OR4C46A6NHA9 309 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 OR5AL1P0C617 328 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 TSPOP30536 169 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 LY6DQ14210 128 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 TMUB1Q9BVT8 246 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 SIRPDQ9H106 197 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 RABAC1Q9UI14 185 aa13.46□□□□□ -0.26
NEK3-206ENST00000611833 TMSB15BA0A087X1C1 80 aa13.45□□□□□ -0.26
NEK3-206ENST00000611833 TMEM189A5PLL7 270 aa13.45□□□□□ -0.26
NEK3-206ENST00000611833 CRXO43186 299 aaPredicted RBP13.45□□□□□ -0.26
NEK3-206ENST00000611833 CTSGP08311 255 aa13.45□□□□□ -0.26
NEK3-206ENST00000611833 FAM106CPP0CH98 169 aa13.45□□□□□ -0.26
NEK3-206ENST00000611833 ZNF124Q15973 351 aa13.45□□□□□ -0.26
NEK3-206ENST00000611833 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
NEK3-206ENST00000611833 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
NEK3-206ENST00000611833 EGR2P11161 476 aaPredicted RBP13.45□□□□□ -0.26
NEK3-206ENST00000611833 TIMM8BQ9Y5J9 83 aaPredicted RBP13.45□□□□□ -0.26
NEK3-206ENST00000611833 WNK2Q9Y3S1 2297 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 SPTBN1Q01082 2364 aaKnown RBP13.44□□□□□ -0.26
NEK3-206ENST00000611833 DLEU1O43261 78 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
NEK3-206ENST00000611833 MAP1LC3CQ9BXW4 147 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 SPTBN4Q9H254 2564 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 SAPCD1Q5SSQ6 148 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 Q8N9W7 124 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 GATD1Q8NB37 220 aa13.44□□□□□ -0.26
NEK3-206ENST00000611833 MRPS16Q9Y3D3 137 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms