RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 ATP5G1P05496 136 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 CA6P23280 308 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 FXYD7P58549 80 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 HHEXQ03014 270 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 Q5XG85 94 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF329Q86UD4 541 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 FLVCR1-AS1Q8TAF5 88 aa13.69□□□□□ -0.22
CDK11B-205ENST00000611150 TRGV11A0A075B6L2 103 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 C19orf71A6NCJ1 209 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 PRSS1P07477 247 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 PRSS12P56730 875 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 PMVKQ15126 192 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 LINC01559Q495D7 138 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 AMN1Q8IY45 258 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 NTN5Q8WTR8 489 aaPredicted RBP13.68□□□□□ -0.22
CDK11B-205ENST00000611150 DPH3Q96FX2 82 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 PTPRBP23467 1997 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 CD3EP07766 207 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 RPL13AP40429 203 aaKnown RBP13.68□□□□□ -0.22
CDK11B-205ENST00000611150 UBE2D1P51668 147 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 PAX8Q06710 450 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF415Q09FC8 603 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 SRSF9Q13242 221 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF56Q15929 161 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF318Q5VUA4 2279 aa13.68□□□□□ -0.22
CDK11B-205ENST00000611150 IGHV3OR15-7A0A075B7D8 119 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 LGALS1P09382 135 aaKnown RBP13.67□□□□□ -0.22
CDK11B-205ENST00000611150 CRYGAP11844 174 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 RNF138Q8WVD3 245 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 CDX4O14627 284 aaPredicted RBP13.67□□□□□ -0.22
CDK11B-205ENST00000611150 CNTFRP26992 372 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 WFDC3Q8IUB2 231 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 MMABQ96EY8 250 aaPredicted RBP13.67□□□□□ -0.22
CDK11B-205ENST00000611150 JPT2Q9H910 190 aa13.67□□□□□ -0.22
CDK11B-205ENST00000611150 KLF13Q9Y2Y9 288 aaPredicted RBP13.67□□□□□ -0.22
CDK11B-205ENST00000611150 ZDBF2Q9HCK1 2354 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF672Q499Z4 452 aaPredicted RBP13.66□□□□□ -0.22
CDK11B-205ENST00000611150 LINC00322Q6ZN03 302 aaPredicted RBP13.66□□□□□ -0.22
CDK11B-205ENST00000611150 MLST8Q9BVC4 326 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 H3BML4 177 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 OVOL1O14753 267 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 GFRA3O60609 400 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 WDFY4Q6ZS81 3184 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 MYOFQ9NZM1 2061 aa13.66□□□□□ -0.22
CDK11B-205ENST00000611150 C17orf98A8MV24 154 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 K7EM74 188 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 RPL35AP18077 110 aaKnown RBP13.65□□□□□ -0.22
CDK11B-205ENST00000611150 LINC00596Q86U02 117 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 MKXQ8IYA7 352 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 ZNF441Q8N8Z8 693 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 D6R8Y8 96 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 LGALS9O00182 355 aa13.65□□□□□ -0.22
CDK11B-205ENST00000611150 TRACP01848 142 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 COX7CP15954 63 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 TMEM258P61165 79 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 EBI3Q14213 229 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 MRPL20Q9BYC9 149 aaKnown RBP13.64□□□□□ -0.23
CDK11B-205ENST00000611150 PHPT1Q9NRX4 125 aaPredicted RBP13.64□□□□□ -0.23
CDK11B-205ENST00000611150 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 C11orf53Q8IXP5 236 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 ORMDL3Q8N138 153 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 MYOZ3Q8TDC0 251 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 HS3ST6Q96QI5 342 aa13.64□□□□□ -0.23
CDK11B-205ENST00000611150 RPP25Q9BUL9 199 aaKnown RBP13.64□□□□□ -0.23
CDK11B-205ENST00000611150 RTTNQ86VV8 2226 aa13.63□□□□□ -0.23
CDK11B-205ENST00000611150 FAM240AA0A1B0GVK7 77 aa13.63□□□□□ -0.23
CDK11B-205ENST00000611150 MUC6Q6W4X9 2439 aa13.63□□□□□ -0.23
CDK11B-205ENST00000611150 U3KQK5 164 aa13.63□□□□□ -0.23
CDK11B-205ENST00000611150 EFNA4P52798 201 aa13.62□□□□□ -0.23
CDK11B-205ENST00000611150 ARMS2P0C7Q2 107 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 CRYGSP22914 178 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 ITLN1Q8WWA0 313 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 FOXC2Q99958 501 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
CDK11B-205ENST00000611150 BRWD1-AS2P59051 145 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 OCIAD1Q9NX40 245 aa13.61□□□□□ -0.23
CDK11B-205ENST00000611150 DIDO1Q9BTC0 2240 aaKnown RBP13.61□□□□□ -0.23
CDK11B-205ENST00000611150 TRAV40A0A0B4J280 105 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 TEX49A0A1B0GTD5 131 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 DTX2Q86UW9 622 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 FMC1Q96HJ9 113 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 PLA2G2FQ9BZM2 168 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 H3BMM0 161 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 EIF4EBP1Q13541 118 aaPredicted RBP13.6□□□□□ -0.23
CDK11B-205ENST00000611150 NDUFA11Q86Y39 141 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 PRSS33Q8NF86 280 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 UBE2WQ96B02 151 aa13.6□□□□□ -0.23
CDK11B-205ENST00000611150 A0A1W2PRU2 124 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 OOEPA6NGQ2 149 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 NABP1Q96AH0 204 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 FAM167A-AS1Q96KT0 104 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
CDK11B-205ENST00000611150 TIMM8AO60220 97 aaPredicted RBP13.59□□□□□ -0.23
CDK11B-205ENST00000611150 ZFAND5O76080 213 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 LINC01600Q96MT4 127 aa13.59□□□□□ -0.23
CDK11B-205ENST00000611150 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms