RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 C10orf126Q8N4M7 172 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 OR4X2Q8NGF9 303 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 VSTM2AQ8TAG5 236 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 MAL2Q969L2 176 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 BORCS8Q96FH0 119 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 S100A16Q96FQ6 103 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 LINC00526Q96FQ7 95 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 DPH3Q96FX2 82 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 AQP10Q96PS8 301 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 SMDT1Q9H4I9 107 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 TXNL4BQ9NX01 149 aaKnown RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 TAC3Q9UHF0 121 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 CHCHD2Q9Y6H1 151 aaPredicted RBP3.08□□□□□ -1.92
LINC00397-202ENST00000606785 DIP2CQ9Y2E4 1556 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 KIAA0556O60303 1618 aa3.08□□□□□ -1.92
LINC00397-202ENST00000606785 STRCQ7RTU9 1775 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 CHD2O14647 1828 aaKnown RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SBF2Q86WG5 1849 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ANK1P16157 1881 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 IGLV4-60A0A075B6I1 120 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 TRBV24-1A0A075B6N3 115 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 KANTRA0A1W2PQU2 76 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 C8orf87E5RJ46 101 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 LGALS9O00182 355 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 LHBP01229 141 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SCGB1C2P0DMR2 95 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 CCL1P22362 96 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 PPIBP23284 216 aaKnown RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SDC2P34741 201 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 CA7P43166 264 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 DAD1P61803 113 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 LSM3P62310 102 aaKnown RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 HLA-DRB3P79483 266 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ELOBQ15370 118 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 MSMO1Q15800 293 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 RTL8BQ17RB0 113 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SPATA45Q537H7 98 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 C9orf153Q5TBE3 101 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 FAM104BQ5XKR9 115 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF880Q6PDB4 577 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 C3orf22Q8N5N4 141 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 TMEM105Q8N8V8 129 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF709Q8N972 641 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SGMS2Q8NHU3 365 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 OTOSQ8NHW6 89 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 SCGB1C1Q8TD33 95 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 RAB37Q96AX2 223 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 IGF2BP2-AS1Q96M15 143 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 NMNAT3Q96T66 252 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 RTL8AQ9BWD3 113 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 NAA60Q9H7X0 242 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 TMEM242Q9NWH2 141 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 NDUFB11Q9NX14 153 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 AMMECR1Q9Y4X0 333 aaPredicted RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ZNF706Q9Y5V0 76 aaPredicted RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 CRB1P82279 1406 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 ABCC1P33527 1531 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 GLI2P10070 1586 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 TUBGCP6Q96RT7 1819 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 DENND4CQ5VZ89 1909 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 NUP205Q92621 2012 aa3.07□□□□□ -1.92
LINC00397-202ENST00000606785 MYO18AQ92614 2054 aaKnown RBP3.07□□□□□ -1.92
LINC00397-202ENST00000606785 TRAV27A0A087WT01 109 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 IZUMO1RA6ND01 250 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 PITX3O75364 302 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 NDUFB6O95139 128 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 APOMO95445 188 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 GYPAP02724 150 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 FKBP1AP62942 108 aaKnown RBP3.06□□□□□ -1.92
LINC00397-202ENST00000606785 TOP2BQ02880 1626 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 PYDC2Q56P42 97 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 BVES-AS1Q5T3Y7 98 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 HES3Q5TGS1 186 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 RALGAPBQ86X10 1494 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 PRR15Q8IV56 129 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 VWDEQ8N2E2 1590 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 MIR7-3HGQ8N6C7 128 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 TNRC6AQ8NDV7 1962 aaKnown RBP3.06□□□□□ -1.92
LINC00397-202ENST00000606785 LY6G5BQ8NDX9 201 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 OR8A1Q8NGG7 326 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 OR10AC1Q8NH08 325 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 OR51H1Q8NH63 302 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 FXYD5Q96DB9 178 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 MS4A6EQ96DS6 147 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 LINC00167Q96N53 147 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 AICDAQ9GZX7 198 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 MARCOQ9UEW3 520 aaPredicted RBP3.06□□□□□ -1.92
LINC00397-202ENST00000606785 RABAC1Q9UI14 185 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 PCTPQ9UKL6 214 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 SCN10AQ9Y5Y9 1956 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 PXMP4Q9Y6I8 212 aa3.06□□□□□ -1.92
LINC00397-202ENST00000606785 LAMB1P07942 1786 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 KDM3BQ7LBC6 1761 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 EDC4Q6P2E9 1401 aaKnown RBP3.05□□□□□ -1.92
LINC00397-202ENST00000606785 C3orf85A0A1B0GTC6 90 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 M0R2P5 195 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 SNCGO76070 127 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 PROSCO94903 275 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 CRYGAP11844 174 aa3.05□□□□□ -1.92
LINC00397-202ENST00000606785 FABP2P12104 132 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms