RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 K7EQM0 130 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 SCO1O75880 301 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 TRBV12-3P01733 135 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 IGHV3-11P01762 117 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 TCRAP04437 139 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 BTN1A1Q13410 526 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 C15orf54Q8N8G6 183 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 CMTM2Q8TAZ6 248 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 GLMPQ8WWB7 406 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 BIN3Q9NQY0 253 aa9.42□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 OTOGQ6ZRI0 2925 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 GNG4P50150 75 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 ADIRFQ15847 76 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 RPEL1Q2QD12 228 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 TMEM75Q8N9X5 138 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 ISOC2Q96AB3 205 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 IGF2BP2-AS1Q96M15 143 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 DUX5Q96PT3 197 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 DERL1Q9BUN8 251 aa9.41□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 IGHV3-35A0A0C4DH35 117 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 IGHV7-4-1A0A0J9YVY3 117 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 CSN1S1P47710 185 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 UBE2G1P62253 170 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 C10orf99Q6UWK7 81 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 UNQ9165/PRO28630Q6UXU0 137 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 C1QL4Q86Z23 238 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 IMMP2LQ96T52 175 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 SMR3AQ99954 134 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 C20orf24Q9BUV8 137 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 SMAD5-AS1Q9Y6J3 95 aa9.4□□□□□ -0.9
NEDD8-MDP1-203ENST00000604306 A0A1B0GUS0 222 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 RBAKDNA6NC62 111 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TCF21O43680 179 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 GCGP01275 180 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 CENPWQ5EE01 88 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 LCNL1Q6ZST4 164 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 BTF3L4Q96K17 158 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 SMPXQ9UHP9 88 aa9.39□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 NOTCH2Q04721 2471 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 DIRC3C9JPN6 131 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 SLC17A3O00476 420 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ISLRO14498 428 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 CRLF1O75462 422 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 LTAP01374 205 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 RNF212Q495C1 297 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 FAM231DQ6ZW35 169 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 CBLN2Q8IUK8 224 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 OCC1Q8TAD7 63 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ZFP30Q9Y2G7 519 aa9.38□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 LINC01619G3V211 115 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 H7BYZ3 331 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 CHEK1O14757 476 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TCTEX1D4Q5JR98 221 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TMEM88Q6PEY1 159 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 COX8CQ7Z4L0 72 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 C17orf77Q96MU5 243 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 YPEL4Q96NS1 127 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 OSTCQ9NRP0 149 aa9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 NSD1Q96L73 2696 aaPredicted RBP9.37□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 IGHV4OR15-8A0A075B7B6 117 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 A0A087WW49 117 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ZNF320A2RRD8 509 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 INAFM1C9JVW0 142 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 APOHP02749 345 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 HOXD3P31249 432 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 GNG5P63218 68 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 FOXL1Q12952 345 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PSG3Q16557 428 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 Q86TA4 180 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 BAGE2Q86Y30 109 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PPP1R14DQ9NXH3 145 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 ZNF492Q9P255 531 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PEMTQ9UBM1 199 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 MLXQ9UH92 298 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TSSC4Q9Y5U2 329 aaPredicted RBP9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 MTORP42345 2549 aa9.36□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 IGHV3OR16-8A0A075B7F1 116 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 TMEM213A2RRL7 107 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 K7EN84 100 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 IGLV2-11P01706 119 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 FOLR2P14207 255 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 S100PP25815 95 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 PROK1P58294 105 aa9.35□□□□□ -0.91
NEDD8-MDP1-203ENST00000604306 FLI1Q01543 452 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms