RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TRAV1-1A0A0B4J248 108 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 GIG44P09565 113 aaPredicted RBP10.05□□□□□ -0.8
SCAF1-203ENST00000598359 ZNF90Q03938 601 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 PSMG4Q5JS54 123 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 AKR1C8PQ5T2L2 129 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 FAM213BQ8TBF2 198 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 GATAD1Q8WUU5 269 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 PBDC1Q9BVG4 233 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 SEC11CQ9BY50 192 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 UQCC1Q9NVA1 299 aa10.05□□□□□ -0.8
SCAF1-203ENST00000598359 ZFP92A6NM28 416 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 ADCYAP1P18509 176 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 M6PRP20645 277 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 FHITP49789 147 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 ATP5IP56385 69 aaPredicted RBP10.04□□□□□ -0.8
SCAF1-203ENST00000598359 DLK1P80370 383 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 SRSF3P84103 164 aaKnown RBP10.04□□□□□ -0.8
SCAF1-203ENST00000598359 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 OR8G2PQ6IF36 304 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
SCAF1-203ENST00000598359 TRPT1Q86TN4 253 aaKnown RBP10.04□□□□□ -0.8
SCAF1-203ENST00000598359 SLC35E1Q96K37 410 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 SMDT1Q9H4I9 107 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 RFNGQ9Y644 331 aa10.04□□□□□ -0.8
SCAF1-203ENST00000598359 UBE2L5PA0A1B0GUS4 154 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 HELTA6NFD8 242 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 FNDC10F2Z333 226 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 BUB3O43684 328 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 HBE1P02100 147 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 GPX4P36969 197 aaPredicted RBP10.03□□□□□ -0.8
SCAF1-203ENST00000598359 NANOS2P60321 138 aaKnown RBP10.03□□□□□ -0.8
SCAF1-203ENST00000598359 MBD3L1Q8WWY6 194 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 RNF125Q96EQ8 232 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 RSG1Q9BU20 258 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 CLEC5AQ9NY25 188 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 WDR83OSQ9Y284 106 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 AGRNO00468 2067 aa10.03□□□□□ -0.8
SCAF1-203ENST00000598359 NUPR2A6NF83 97 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 MPDU1O75352 247 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 H2AFB1P0C5Y9 115 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 DEFB1P60022 68 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 LYZP61626 148 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 TMEM41BQ5BJD5 291 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 SIGLEC15Q6ZMC9 328 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 LINC00476Q8WZB0 136 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 TREM1Q9NP99 234 aa10.02□□□□□ -0.81
SCAF1-203ENST00000598359 IGKV1OR2-108A0A075B7D4 117 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 LY6G6CO95867 125 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 APOC3P02656 99 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 RAB11AP62491 216 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 PEA15Q15121 130 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 GUK1Q16774 197 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 PHLDA1Q8WV24 401 aaPredicted RBP10.01□□□□□ -0.81
SCAF1-203ENST00000598359 NRN1Q9NPD7 142 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 RPRMQ9NS64 109 aa10.01□□□□□ -0.81
SCAF1-203ENST00000598359 C17orf112F2Z3M2 114 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 SCO1O75880 301 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 MBP02144 154 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 SFTA3P0C7M3 94 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 ATF4P18848 351 aaPredicted RBP10□□□□□ -0.81
SCAF1-203ENST00000598359 FGF7P21781 194 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 RAB2AP61019 212 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 AKR1C1Q04828 323 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 SVBPQ8N300 66 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
SCAF1-203ENST00000598359 C11orf68Q9H3H3 251 aaKnown RBP10□□□□□ -0.81
SCAF1-203ENST00000598359 IGHV4-28A0A0C4DH34 117 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 C9JQL5 133 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 F8W036 122 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 AGPAT2O15120 278 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 RBMY1A1P0DJD3 496 aaKnown RBP9.99□□□□□ -0.81
SCAF1-203ENST00000598359 RBMY1CP0DJD4 496 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 GATA2P23769 480 aaPredicted RBP9.99□□□□□ -0.81
SCAF1-203ENST00000598359 RBMY1FQ15415 496 aaKnown RBP9.99□□□□□ -0.81
SCAF1-203ENST00000598359 ZNF726P1Q15940 193 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 ZNF506Q5JVG8 444 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 THAP8Q8NA92 274 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 Q8NAQ8 132 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 C11orf45Q8TAV5 145 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 TRGV9Q99603 122 aa9.99□□□□□ -0.81
SCAF1-203ENST00000598359 KLK5Q9Y337 293 aaPredicted RBP9.99□□□□□ -0.81
SCAF1-203ENST00000598359 NDUFS6O75380 124 aaKnown RBP9.98□□□□□ -0.81
SCAF1-203ENST00000598359 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
SCAF1-203ENST00000598359 SNRPD3P62318 126 aaKnown RBP9.98□□□□□ -0.81
SCAF1-203ENST00000598359 GDF5OSQ5U4N7 250 aa9.98□□□□□ -0.81
SCAF1-203ENST00000598359 MORN3Q6PF18 240 aaPredicted RBP9.98□□□□□ -0.81
SCAF1-203ENST00000598359 NKX6-2Q9C056 277 aaPredicted RBP9.98□□□□□ -0.81
SCAF1-203ENST00000598359 KCNIP2Q9NS61 270 aa9.98□□□□□ -0.81
SCAF1-203ENST00000598359 X6R8D5 127 aa9.98□□□□□ -0.81
SCAF1-203ENST00000598359 CTXND1A0A1B0GTU2 59 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 RBFOX3A6NFN3 312 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 H3BMM0 161 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 SNAPINO95295 136 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 FXYD7P58549 80 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 CCL20P78556 96 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 ATRAIDQ6UW56 229 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 OR10G4Q8NGN3 311 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 SFT2D1Q8WV19 159 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 NPVFQ9HCQ7 196 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms