RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 RFNGQ9Y644 331 aa12.23□□□□□ -0.45
RETREG3-210ENST00000590541 IGHV3OR16-12A0A075B7B8 117 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 TEX48A0A1B0GUV7 120 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 C5orf51A6NDU8 294 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 GOSR2O14653 212 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 OR5G3P0C626 314 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 PVALBP20472 110 aaPredicted RBP12.22□□□□□ -0.45
RETREG3-210ENST00000590541 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 C2orf50Q96LR7 162 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 DOK5Q9P104 306 aa12.22□□□□□ -0.45
RETREG3-210ENST00000590541 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 A8MTW9 85 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 FAM25EA8MYX2 175 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 CCNKO75909 580 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 DUSP14O95147 198 aaKnown RBP12.21□□□□□ -0.45
RETREG3-210ENST00000590541 FXYD7P58549 80 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 ASAH1Q13510 395 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 RAB31Q13636 194 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 FAM78BQ5VT40 261 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 ZNF709Q8N972 641 aa12.21□□□□□ -0.45
RETREG3-210ENST00000590541 A0A087X0K7 114 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 CCSO14618 274 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 IGKV3-20P01619 116 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 GSG1LQ6UXU4 331 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 ZNRF2Q8NHG8 242 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 C17orf77Q96MU5 243 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 SEC22CQ9BRL7 303 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 ARL6Q9H0F7 186 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 GOLT1BQ9Y3E0 138 aa12.2□□□□□ -0.46
RETREG3-210ENST00000590541 LSM5Q9Y4Y9 91 aaKnown RBP12.2□□□□□ -0.46
RETREG3-210ENST00000590541 AGPAT2O15120 278 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 BCAP31P51572 246 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 DEFB1P60022 68 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 SPATA12Q7Z6I5 190 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 C15orf53Q8NAA6 179 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 C20orf173Q96LM9 149 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 ARV1Q9H2C2 271 aa12.19□□□□□ -0.46
RETREG3-210ENST00000590541 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
RETREG3-210ENST00000590541 F6UB75 175 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 CXCL2P19875 107 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 CAV2P51636 162 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 FGL1Q08830 312 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 SLC38A11Q08AI6 406 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 ARL16Q0P5N6 197 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 UHRF2Q96PU4 802 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 SLC35B3Q9H1N7 401 aa12.18□□□□□ -0.46
RETREG3-210ENST00000590541 GPN1Q9HCN4 374 aaPredicted RBP12.18□□□□□ -0.46
RETREG3-210ENST00000590541 S100A11P31949 105 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 B2MP61769 119 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 HBG1P69891 147 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 HBG2P69892 147 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 PATE2Q6UY27 113 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 LRRC20Q8TCA0 184 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 C11orf1Q9H5F2 150 aa12.17□□□□□ -0.46
RETREG3-210ENST00000590541 TRAV8-2A0A0B4J237 113 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 A6NHS1 94 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 COX7A2P2O60397 106 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 UPK1BO75841 260 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 HBE1P02100 147 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 DAD1P61803 113 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 IL15RAQ13261 267 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 LCN15Q6UWW0 184 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 AMTNQ6UX39 209 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 Q6ZRG5 221 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 LINC00305Q7Z4B0 112 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 STX12Q86Y82 276 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 BPIFA4PQ86YQ2 179 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 C1orf158Q8N1D5 194 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 IGF2BP2-AS1Q96M15 143 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 LYRM2Q9NU23 88 aaPredicted RBP12.16□□□□□ -0.46
RETREG3-210ENST00000590541 UQCC1Q9NVA1 299 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 PTTG2Q9NZH5 202 aa12.16□□□□□ -0.46
RETREG3-210ENST00000590541 CXCL3P19876 107 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 CAMLGP49069 296 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 SULT1A1P50225 295 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 CNN1P51911 297 aaKnown RBP12.15□□□□□ -0.46
RETREG3-210ENST00000590541 KRTAP10-2P60368 255 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 ATP6V1FQ16864 119 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 VWC2Q2TAL6 325 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 ZNF738Q8NE65 137 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 CHAC2Q8WUX2 184 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 MGST2Q99735 147 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 SLC50A1Q9BRV3 221 aa12.15□□□□□ -0.46
RETREG3-210ENST00000590541 FAM24AA6NFZ4 105 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 PRAF2O60831 178 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 CST7O76096 145 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 S100A10P60903 97 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 RAB32Q13637 225 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 PSG3Q16557 428 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 RRN3P1Q2M238 152 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 NRARPQ7Z6K4 114 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 OR11H7Q8NGC8 314 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 OR1L4Q8NGR5 311 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 PFDN5Q99471 154 aa12.14□□□□□ -0.47
RETREG3-210ENST00000590541 DNAJC4Q9NNZ3 241 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms