RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OR4B1Q8NGF8 309 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 DAZAP1Q96EP5 407 aaKnown RBP8.09□□□□□ -1.11
VPS25-203ENST00000589520 SERTAD4Q9NUC0 356 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 MTORP42345 2549 aa8.09□□□□□ -1.11
VPS25-203ENST00000589520 A0A087X0K7 114 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 IZUMO1RA6ND01 250 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 SMIM6P0DI80 62 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 S100A2P29034 98 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 PPIFP30405 207 aaKnown RBP8.08□□□□□ -1.12
VPS25-203ENST00000589520 GPR183P32249 361 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 C9orf152Q5JTZ5 239 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 TOMM20LQ6UXN7 152 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 TMEM219Q86XT9 240 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 NUDT10Q8NFP7 164 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 NUDT11Q96G61 164 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 LINC00479Q96M42 142 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 METTL26Q96S19 204 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 GFRA4Q9GZZ7 299 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 NAT8BQ9UHF3 227 aa8.08□□□□□ -1.12
VPS25-203ENST00000589520 SOX21Q9Y651 276 aaPredicted RBP8.08□□□□□ -1.12
VPS25-203ENST00000589520 TRAV34A0A0B4J273 112 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 LINC01548A6NM66 108 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 A8MWL6 223 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 DIRC3C9JPN6 131 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 SLC17A3O00476 420 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 BUB3O43684 328 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 AVPP01185 164 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 IGHV3-23P01764 117 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 TRGV3P03979 118 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 GNG5P63218 68 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 SAPCD1Q5SSQ6 148 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 CYB5R2Q6BCY4 276 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 CLEC19AQ6UXS0 136 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 ATP5L2Q7Z4Y8 100 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 TSKUQ8WUA8 353 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 NRGNQ92686 78 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 CCDC140Q96MF4 163 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 SLC50A1Q9BRV3 221 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 PRSS22Q9GZN4 317 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 RNASE7Q9H1E1 156 aaKnown RBP8.07□□□□□ -1.12
VPS25-203ENST00000589520 ZFAND3Q9H8U3 227 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 S4R3C0 116 aa8.07□□□□□ -1.12
VPS25-203ENST00000589520 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.06□□□□□ -1.12
VPS25-203ENST00000589520 NDUFA4O00483 81 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 FSHBP01225 129 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 P01737 135 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 HLA-DQA1P01909 254 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 IGHV4-31P0DP07 118 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 LY6EQ16553 131 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 PSG3Q16557 428 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 Q5PR19 223 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 COX8CQ7Z4L0 72 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 Q86TA4 180 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 WIPF2Q8TF74 440 aaPredicted RBP8.06□□□□□ -1.12
VPS25-203ENST00000589520 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 PRDM13Q9H4Q3 707 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 GNB4Q9HAV0 340 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 ZNF331Q9NQX6 463 aaPredicted RBP8.06□□□□□ -1.12
VPS25-203ENST00000589520 PSG8Q9UQ74 426 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 U3KQE9 123 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 WNK2Q9Y3S1 2297 aa8.06□□□□□ -1.12
VPS25-203ENST00000589520 A0A1W2PS18 150 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 C19orf71A6NCJ1 209 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 ZNF785A8K8V0 405 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 RNF223E7ERA6 249 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 IGLV1-40P01703 118 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 ARL3P36405 182 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 IER3P46695 156 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 DNLZQ5SXM8 178 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 EXOC3-AS1Q8N2X6 119 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 MRPL53Q96EL3 112 aaKnown RBP8.05□□□□□ -1.12
VPS25-203ENST00000589520 RPP21Q9H633 154 aaKnown RBP8.05□□□□□ -1.12
VPS25-203ENST00000589520 RPH3ALQ9UNE2 315 aa8.05□□□□□ -1.12
VPS25-203ENST00000589520 RBAKDNA6NC62 111 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 SH2D7A6NKC9 451 aaPredicted RBP8.04□□□□□ -1.12
VPS25-203ENST00000589520 NPIPB6E9PJ23 425 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 H3BTX0 84 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 IGLV2-11P01706 119 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
VPS25-203ENST00000589520 CT45A10P0DMU9 189 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 COL8A1P27658 744 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 FOXA3P55318 350 aaPredicted RBP8.04□□□□□ -1.12
VPS25-203ENST00000589520 TPPP2P59282 170 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 DEFB112Q30KQ8 113 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 Q6YL49 198 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 PRNTQ86SH4 94 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 HIST3H2BBQ8N257 126 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 GBGT1Q8N5D6 347 aa8.04□□□□□ -1.12
VPS25-203ENST00000589520 SNURFLB1AK76 121 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 BLCAPP62952 87 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 CFHR3Q02985 330 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 Q0VG73 95 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 Q6AWC8 147 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 PRR27Q6MZM9 219 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 C16orf54Q6UWD8 224 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 CIARTQ8N365 385 aaPredicted RBP8.03□□□□□ -1.12
VPS25-203ENST00000589520 NHLRC2Q8NBF2 726 aa8.03□□□□□ -1.12
VPS25-203ENST00000589520 C17orf77Q96MU5 243 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms