RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 V9GYH0 126 aa11.77□□□□□ -0.53
LINC01842-201ENST00000588275 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
LINC01842-201ENST00000588275 ANXA7P20073 488 aaKnown RBP11.76□□□□□ -0.53
LINC01842-201ENST00000588275 RPUSD4Q96CM3 377 aaKnown RBP11.76□□□□□ -0.53
LINC01842-201ENST00000588275 NOP10Q9NPE3 64 aaKnown RBP11.76□□□□□ -0.53
LINC01842-201ENST00000588275 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
LINC01842-201ENST00000588275 A0A087X0K7 114 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 SCGB1D2O95969 90 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 METTL15P1P0C7V9 234 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 CDKN1BP46527 198 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 SELENOTP62341 195 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 OR5I1Q13606 314 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 S100A7AQ86SG5 101 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 MAPKAPK5-AS1Q8N8E1 139 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 ARV1Q9H2C2 271 aa11.75□□□□□ -0.53
LINC01842-201ENST00000588275 C9orf170A2RU37 121 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 PMS2P5A8MQ11 134 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 S100A5P33763 92 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 PLP1P60201 277 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 DLK1P80370 383 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 ID3Q02535 119 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 PARD6GQ9BYG4 376 aaPredicted RBP11.74□□□□□ -0.53
LINC01842-201ENST00000588275 MGAT4CQ9UBM8 478 aa11.74□□□□□ -0.53
LINC01842-201ENST00000588275 CCDC160A6NGH7 325 aa11.73□□□□□ -0.53
LINC01842-201ENST00000588275 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
LINC01842-201ENST00000588275 TMEM263Q8WUH6 116 aaKnown RBP11.73□□□□□ -0.53
LINC01842-201ENST00000588275 A0A0J9YY99 117 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 H3BTX0 84 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 H7BYZ3 331 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 J3KRW8 73 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 INPP1P49441 399 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 UBE2MP61081 183 aaKnown RBP11.72□□□□□ -0.53
LINC01842-201ENST00000588275 KIR3DS1Q14943 382 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 TEPPQ6URK8 271 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 ZNF493Q6ZR52 646 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 CCDC190Q86UF4 302 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 OR10J6PQ8NGY7 276 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 RNASE8Q8TDE3 154 aaKnown RBP11.72□□□□□ -0.53
LINC01842-201ENST00000588275 DEDD2Q8WXF8 326 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 GNPNAT1Q96EK6 184 aaPredicted RBP11.72□□□□□ -0.53
LINC01842-201ENST00000588275 SMIM8Q96KF7 97 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
LINC01842-201ENST00000588275 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
LINC01842-201ENST00000588275 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 GOSR2O14653 212 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 MRPS12O15235 138 aaKnown RBP11.71□□□□□ -0.53
LINC01842-201ENST00000588275 TMEM14EPQ6UXP3 125 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 LINC00305Q7Z4B0 112 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 SPATA12Q7Z6I5 190 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 CCDC28AQ8IWP9 274 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 SLC50A1Q9BRV3 221 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 Q9H8V8 135 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 RNF24Q9Y225 148 aa11.71□□□□□ -0.53
LINC01842-201ENST00000588275 LINC00854A0A1B0GVQ3 168 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GAGE12BA1L429 117 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 COX7A2P2O60397 106 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GAGE7O76087 117 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 CXCL2P19875 107 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 GFI1BQ5VTD9 330 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 ZNF546Q86UE3 836 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 ZNF331Q9NQX6 463 aaPredicted RBP11.7□□□□□ -0.54
LINC01842-201ENST00000588275 DNAH5Q8TE73 4624 aa11.7□□□□□ -0.54
LINC01842-201ENST00000588275 SNURFLB1AK76 121 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 PRAC2D3DTV9 90 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 SLC17A3O00476 420 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 RLN2P04090 185 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 OR4E1P0C645 316 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 M6PRP20645 277 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 IAH1Q2TAA2 248 aaPredicted RBP11.69□□□□□ -0.54
LINC01842-201ENST00000588275 C4orf46Q504U0 113 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 TRIQKQ629K1 86 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 BPIFA4PQ86YQ2 179 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 GSKIPQ9P0R6 139 aa11.69□□□□□ -0.54
LINC01842-201ENST00000588275 FNDC10F2Z333 226 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 K7EPK0 472 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 AGPAT2O15120 278 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 NDUFB6O95139 128 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 RXFP4Q8TDU9 374 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 C20orf144Q9BQM9 153 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
LINC01842-201ENST00000588275 NAP1L6A6NFF2 107 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 ZNF701M0R085 212 aaPredicted RBP11.67□□□□□ -0.54
LINC01842-201ENST00000588275 TSC22D2O75157 780 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 HOXA5P20719 270 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 ARL16Q0P5N6 197 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 SPANXN2Q5MJ10 180 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 SRRQ9GZT4 340 aa11.67□□□□□ -0.54
LINC01842-201ENST00000588275 RCL1Q9Y2P8 373 aaKnown RBP11.67□□□□□ -0.54
LINC01842-201ENST00000588275 TRAV12-3A0A0B4J271 114 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms