RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 RNF125Q96EQ8 232 aa13.29□□□□□ -0.28
PRKCSH-205ENST00000587327 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
PRKCSH-205ENST00000587327 TPRP12270 2363 aaKnown RBP13.29□□□□□ -0.28
PRKCSH-205ENST00000587327 ATRXP46100 2492 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 HLA-DRB1P01911 266 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 GATD1Q8NB37 220 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 HSPB8Q9UJY1 196 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 RELNP78509 3460 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 MRPS12O15235 138 aaKnown RBP13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 IL4P05112 153 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 CRIP1P50238 77 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 ZNF414Q96IQ9 312 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 ASCL2Q99929 193 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
PRKCSH-205ENST00000587327 A0A1B0GW15 77 aa13.27□□□□□ -0.28
PRKCSH-205ENST00000587327 CSN3P07498 182 aa13.27□□□□□ -0.28
PRKCSH-205ENST00000587327 SFTPCP11686 197 aa13.27□□□□□ -0.28
PRKCSH-205ENST00000587327 ONECUT1Q9UBC0 465 aa13.27□□□□□ -0.28
PRKCSH-205ENST00000587327 SPTBN4Q9H254 2564 aa13.27□□□□□ -0.29
PRKCSH-205ENST00000587327 WI2-2373I1.2A0A1W2PRP0 233 aa13.27□□□□□ -0.29
PRKCSH-205ENST00000587327 HSBP1L1C9JCN9 74 aa13.27□□□□□ -0.29
PRKCSH-205ENST00000587327 NBR2O15453 112 aa13.27□□□□□ -0.29
PRKCSH-205ENST00000587327 UBE2V1Q13404 147 aa13.27□□□□□ -0.29
PRKCSH-205ENST00000587327 FCGR2BP31994 310 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 RELQ04864 619 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 ZNF672Q499Z4 452 aaPredicted RBP13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 Q6AWC8 147 aa13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 SLC25A34Q6PIV7 304 aa13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 LY6G5BQ8NDX9 201 aa13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 AP5S1Q9NUS5 200 aa13.26□□□□□ -0.29
PRKCSH-205ENST00000587327 M0R3E3 92 aa13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 PRB4P10163 310 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 MPV17L2Q567V2 206 aa13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 KLF17Q5JT82 389 aaPredicted RBP13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 NPBQ8NG41 125 aa13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 MCRIP2Q9BUT9 160 aaKnown RBP13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 DPM3Q9P2X0 92 aa13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 HILPDAQ9Y5L2 63 aa13.25□□□□□ -0.29
PRKCSH-205ENST00000587327 PDE6HQ13956 83 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 LINC01545Q5VT33 79 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 CFHR4Q92496 578 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 RAB1BQ9H0U4 201 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 SCRT2Q9NQ03 307 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 CBY1Q9Y3M2 126 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 NBASA2RRP1 2371 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 TRAV30A0A087WSZ9 112 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 H0Y8G0 127 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 NDUFA3O95167 84 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 S100A7AQ86SG5 101 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 BCL6BQ8N143 479 aaPredicted RBP13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 TPPP3Q9BW30 176 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
PRKCSH-205ENST00000587327 LRBAP50851 2863 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 GNG7O60262 68 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 ZNF493Q6ZR52 646 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 C8orf49Q96NF6 230 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 ZNF747Q9BV97 191 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 S4R3C0 116 aa13.23□□□□□ -0.29
PRKCSH-205ENST00000587327 NUDT3O95989 172 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 ARF6P62330 175 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 PRSS3P2Q8NHM4 247 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 TIMM8BQ9Y5J9 83 aaPredicted RBP13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 DCHS2Q6V1P9 2916 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 ABCA4P78363 2273 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 FA2HQ7L5A8 372 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 FANCD2OSQ96PS1 177 aa13.22□□□□□ -0.29
PRKCSH-205ENST00000587327 CEACAM3P40198 252 aa13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 CSN1S1P47710 185 aa13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 BVES-AS1Q5T3Y7 98 aa13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 ZNF48Q96MX3 618 aaPredicted RBP13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 PMCHL2Q9BQD1 86 aa13.21□□□□□ -0.29
PRKCSH-205ENST00000587327 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 IGHV2-70DA0A0C4DH43 119 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 MFAP4P55083 255 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 C5orf64Q2M2E5 130 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 C12orf54Q6X4T0 127 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.3
PRKCSH-205ENST00000587327 NPIPB5A8MRT5 1133 aa13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 FBLN7Q53RD9 439 aa13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 LYZL1Q6UWQ5 148 aa13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 IFI27P40305 119 aaPredicted RBP13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 HES1Q14469 280 aa13.2□□□□□ -0.3
PRKCSH-205ENST00000587327 TMEM189A5PLL7 270 aa13.19□□□□□ -0.3
PRKCSH-205ENST00000587327 LY6HO94772 140 aa13.19□□□□□ -0.3
PRKCSH-205ENST00000587327 PSG9Q00887 426 aa13.19□□□□□ -0.3
PRKCSH-205ENST00000587327 ZNF562Q6V9R5 426 aa13.19□□□□□ -0.3
PRKCSH-205ENST00000587327 U3KQK5 164 aa13.19□□□□□ -0.3
PRKCSH-205ENST00000587327 D6R8Y8 96 aa13.18□□□□□ -0.3
PRKCSH-205ENST00000587327 TAX1BP3O14907 124 aa13.18□□□□□ -0.3
PRKCSH-205ENST00000587327 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
PRKCSH-205ENST00000587327 KLRD1Q13241 179 aa13.18□□□□□ -0.3
PRKCSH-205ENST00000587327 FAM106AQ4KMX7 169 aa13.18□□□□□ -0.3
PRKCSH-205ENST00000587327 DEFB125Q8N687 156 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms