RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 LCN15Q6UWW0 184 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 RNF182Q8N6D2 247 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 OR11H2Q8NH07 326 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 LRRC20Q8TCA0 184 aa16.18■□□□□ 0.18
SMARCD2-206ENST00000577990 A0A0J9YX75 114 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 C17orf112F2Z3M2 114 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 IGKV3-20P01619 116 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 GCSAMLQ5JQS6 135 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 OR4B1Q8NGF8 309 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 CLUHP3Q96NS8 147 aa16.17■□□□□ 0.18
SMARCD2-206ENST00000577990 IGLC2P0DOY2 106 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 ZNF738Q8NE65 137 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 IL17DQ8TAD2 202 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 SCGB1C1Q8TD33 95 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 SLC50A1Q9BRV3 221 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 C1QTNF4Q9BXJ3 329 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 WFDC1Q9HC57 220 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 CLEC5AQ9NY25 188 aa16.16■□□□□ 0.18
SMARCD2-206ENST00000577990 DNAH1Q9P2D7 4330 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 SNRPCP09234 159 aaKnown RBP16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 Q5BKY6 102 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 FAM78BQ5VT40 261 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 CSNK1G2-AS1Q8NCQ2 148 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 PARD6GQ9BYG4 376 aaPredicted RBP16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 HRH4Q9H3N8 390 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 XCL2Q9UBD3 114 aa16.15■□□□□ 0.18
SMARCD2-206ENST00000577990 HLA-DMBP28068 263 aa16.14■□□□□ 0.17
SMARCD2-206ENST00000577990 PSG3Q16557 428 aa16.14■□□□□ 0.17
SMARCD2-206ENST00000577990 AQP10Q96PS8 301 aa16.14■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF331Q9NQX6 463 aaPredicted RBP16.14■□□□□ 0.17
SMARCD2-206ENST00000577990 H3BQ15 152 aa16.13■□□□□ 0.17
SMARCD2-206ENST00000577990 H3BTX0 84 aa16.13■□□□□ 0.17
SMARCD2-206ENST00000577990 PSG9Q00887 426 aa16.13■□□□□ 0.17
SMARCD2-206ENST00000577990 GUK1Q16774 197 aa16.13■□□□□ 0.17
SMARCD2-206ENST00000577990 TMEM14CQ9P0S9 112 aa16.13■□□□□ 0.17
SMARCD2-206ENST00000577990 A8MTW9 85 aa16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF705EA8MWA4 302 aaPredicted RBP16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 SLC17A3O00476 420 aa16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 DUSP14O95147 198 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 FXYD7P58549 80 aa16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 OR2T35Q8NGX2 323 aa16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 C11orf68Q9H3H3 251 aaKnown RBP16.12■□□□□ 0.17
SMARCD2-206ENST00000577990 CNN1P51911 297 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 FFAR4Q5NUL3 377 aa16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 MIR17HGQ75NE6 70 aa16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 SAT2Q96F10 170 aaPredicted RBP16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 MRPL32Q9BYC8 188 aaKnown RBP16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 SLC35B3Q9H1N7 401 aa16.11■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF705DP0CH99 300 aaPredicted RBP16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF705BP0CI00 300 aaPredicted RBP16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 RPUSD4Q96CM3 377 aaKnown RBP16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 SLC25A2Q9BXI2 301 aa16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 MFFQ9GZY8 342 aa16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF586Q9NXT0 402 aa16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 FUT9Q9Y231 359 aa16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 X6R8D5 127 aa16.1■□□□□ 0.17
SMARCD2-206ENST00000577990 FXYD6-FXYD2A0A087WZ82 144 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 LCE6AA0A183 80 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF253O75346 499 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 PYYP10082 97 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 HIST1H1EP10412 219 aaKnown RBP16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 ZNF266Q14584 549 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 AMTNQ6UX39 209 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 Q8NAQ8 132 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 INO80EQ8NBZ0 244 aaPredicted RBP16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 OR8A1Q8NGG7 326 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 FAM167A-AS1Q96KT0 104 aa16.09■□□□□ 0.17
SMARCD2-206ENST00000577990 TRBV19A0A075B6N1 114 aa16.08■□□□□ 0.16
SMARCD2-206ENST00000577990 MIFP14174 115 aa16.08■□□□□ 0.16
SMARCD2-206ENST00000577990 HIST1H1AQ02539 215 aaPredicted RBP16.08■□□□□ 0.16
SMARCD2-206ENST00000577990 IGHV4-28A0A0C4DH34 117 aa16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 DEFB4AO15263 64 aa16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 TNFSF18Q9UNG2 199 aa16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 TIMM9Q9Y5J7 89 aa16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 RFNGQ9Y644 331 aa16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 PLECQ15149 4684 aaKnown RBP16.07■□□□□ 0.16
SMARCD2-206ENST00000577990 RNF222A6NCQ9 220 aa16.06■□□□□ 0.16
SMARCD2-206ENST00000577990 ZNF705FA8MVS1 300 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-206ENST00000577990 G3V3Q6 166 aa16.06■□□□□ 0.16
SMARCD2-206ENST00000577990 PRB4P10163 310 aaPredicted RBP16.06■□□□□ 0.16
SMARCD2-206ENST00000577990 PDE6HQ13956 83 aa16.06■□□□□ 0.16
SMARCD2-206ENST00000577990 HYDINQ4G0P3 5121 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 AMBPP02760 352 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 RHOBP62745 196 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 ZNF705AQ6ZN79 300 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 BLNKQ8WV28 456 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 PAXXQ9BUH6 204 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 OR51M1Q9H341 326 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 ALMS1Q8TCU4 4167 aa16.05■□□□□ 0.16
SMARCD2-206ENST00000577990 BOLA2-SMG1P6H3BVE0 249 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 NDUFB4O95168 129 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 RBMY1A1P0DJD3 496 aaKnown RBP16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 RBMY1CP0DJD4 496 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 PMS2P11Q13670 270 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 RBMY1FQ15415 496 aaKnown RBP16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 SPINK13Q1W4C9 94 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 ACOT6Q3I5F7 207 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 HSD17B11Q8NBQ5 300 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 GOLT1BQ9Y3E0 138 aa16.04■□□□□ 0.16
SMARCD2-206ENST00000577990 CXorf65A6NEN9 183 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms