RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FBN3Q75N90 2809 aa12.45□□□□□ -0.42
COMMD4-224ENST00000568877 EIF3GO75821 320 aaKnown RBP eCLIP12.44□□□□□ -0.42
COMMD4-224ENST00000568877 PYYP10082 97 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 HIST1H1EP10412 219 aaKnown RBP12.44□□□□□ -0.42
COMMD4-224ENST00000568877 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-224ENST00000568877 GUK1Q16774 197 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 KHDC3LQ587J8 217 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 LCN15Q6UWW0 184 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 APRG1Q8IVJ8 170 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 LRRC20Q8TCA0 184 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 PAXXQ9BUH6 204 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 ACTR3CQ9C0K3 210 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
COMMD4-224ENST00000568877 A8MZ25 164 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 H3BTX0 84 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 OR7C2O60412 319 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF124Q15973 351 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 PSMG4Q5JS54 123 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 RAB24Q969Q5 203 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF503Q96F45 646 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 LINC00052Q96N35 136 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 SRD5A3Q9H8P0 318 aa12.43□□□□□ -0.42
COMMD4-224ENST00000568877 TRBV19A0A075B6N1 114 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 HMGB3O15347 200 aaKnown RBP12.42□□□□□ -0.42
COMMD4-224ENST00000568877 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
COMMD4-224ENST00000568877 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 TMED6Q8WW62 240 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 FXYD5Q96DB9 178 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 SAT2Q96F10 170 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-224ENST00000568877 CITED4Q96RK1 184 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 SLC50A1Q9BRV3 221 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
COMMD4-224ENST00000568877 UMAD1C9J7I0 102 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 OR10J4P0C629 311 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 STAG3L2P0CL84 134 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 STAG3L3P0CL85 134 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 IGFL4Q6B9Z1 124 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 PQLC2Q6ZP29 291 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 C20orf173Q96LM9 149 aa12.41□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF331Q9NQX6 463 aaPredicted RBP12.41□□□□□ -0.42
COMMD4-224ENST00000568877 CTXND1A0A1B0GTU2 59 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 SLC17A3O00476 420 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF253O75346 499 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 NBEAP1P0C6P0 100 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 FRMD6-AS1P0C7T7 363 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
COMMD4-224ENST00000568877 PDE6HQ13956 83 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 ZNF726P1Q15940 193 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 SSX7Q7RTT5 188 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 RNF182Q8N6D2 247 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 BOLA1Q9Y3E2 137 aa12.4□□□□□ -0.42
COMMD4-224ENST00000568877 NDUFB4O95168 129 aa12.39□□□□□ -0.43
COMMD4-224ENST00000568877 ARL14EPLP0DKL9 152 aa12.39□□□□□ -0.43
COMMD4-224ENST00000568877 HLA-DMBP28068 263 aa12.39□□□□□ -0.43
COMMD4-224ENST00000568877 PSG3Q16557 428 aa12.39□□□□□ -0.43
COMMD4-224ENST00000568877 CLEC5AQ9NY25 188 aa12.39□□□□□ -0.43
COMMD4-224ENST00000568877 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
COMMD4-224ENST00000568877 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
COMMD4-224ENST00000568877 KNCNA6PVL3 124 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 BOLA2-SMG1P6H3BVE0 249 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 CXorf1O96002 111 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
COMMD4-224ENST00000568877 FHITP49789 147 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 PSG9Q00887 426 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 DPPA3Q6W0C5 159 aa12.38□□□□□ -0.43
COMMD4-224ENST00000568877 LINC00322Q6ZN03 302 aaPredicted RBP12.38□□□□□ -0.43
COMMD4-224ENST00000568877 LOC102724200A0A096LPH7 203 aaPredicted RBP12.37□□□□□ -0.43
COMMD4-224ENST00000568877 DEFB1P60022 68 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 ACTL10Q5JWF8 245 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 FOXI2Q6ZQN5 318 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 STHQ8IWL8 128 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 ZNF738Q8NE65 137 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 FAM213BQ8TBF2 198 aa12.37□□□□□ -0.43
COMMD4-224ENST00000568877 GCHFRP30047 84 aa12.36□□□□□ -0.43
COMMD4-224ENST00000568877 RAB5CP51148 216 aa12.36□□□□□ -0.43
COMMD4-224ENST00000568877 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
COMMD4-224ENST00000568877 SAV1Q9H4B6 383 aaPredicted RBP12.36□□□□□ -0.43
COMMD4-224ENST00000568877 MAP1LC3B2A6NCE7 125 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 F6UB75 175 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 RPL35AP18077 110 aaKnown RBP12.35□□□□□ -0.43
COMMD4-224ENST00000568877 SULT1A2P50226 295 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 RANP62826 216 aaKnown RBP12.35□□□□□ -0.43
COMMD4-224ENST00000568877 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 EBLN2Q6P2I7 272 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 LYPD1Q8N2G4 141 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 EXOC3-AS1Q8N2X6 119 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 SUN5Q8TC36 379 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 RPUSD4Q96CM3 377 aaKnown RBP12.35□□□□□ -0.43
COMMD4-224ENST00000568877 B9D2Q9BPU9 175 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 MAP1LC3BQ9GZQ8 125 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 AAMDCQ9H7C9 122 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
COMMD4-224ENST00000568877 A0A0J9YX75 114 aa12.34□□□□□ -0.43
COMMD4-224ENST00000568877 ZNF705FA8MVS1 300 aaPredicted RBP12.34□□□□□ -0.43
COMMD4-224ENST00000568877 H3BMM0 161 aa12.34□□□□□ -0.43
COMMD4-224ENST00000568877 HLA-DRB4P13762 266 aa12.34□□□□□ -0.43
COMMD4-224ENST00000568877 FGF8P55075 233 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms