RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 CT45A3Q8NHU0 189 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF479Q96JC4 524 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 VGLL1Q99990 258 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 LINC00574Q9H8X3 128 aa4.34□□□□□ -1.71
LINC01541-202ENST00000568095 ZNF71Q9NQZ8 489 aaPredicted RBP4.34□□□□□ -1.71
LINC01541-202ENST00000568095 TCRBV4S1A1TA0A5B7 111 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 TMEM8BA6NDV4 472 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.72
LINC01541-202ENST00000568095 A8MZ25 164 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 SHISA9B4DS77 424 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 IGLV2-11P01706 119 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 P01737 135 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 SAA2P0DJI9 122 aaPredicted RBP4.34□□□□□ -1.72
LINC01541-202ENST00000568095 HLA-DRB4P13762 266 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 MPV17P39210 176 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 CSN1S1P47710 185 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 GNG5P63218 68 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 MLANAQ16655 118 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 C17orf58Q2M2W7 97 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 UTF1Q5T230 341 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 LCNL1Q6ZST4 164 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 C8orf86Q6ZUL3 223 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 STXBP6Q8NFX7 210 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 VCX2Q9H322 139 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 NDUFA4L2Q9NRX3 87 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 HLA-DRB4X5D2U9 266 aa4.34□□□□□ -1.72
LINC01541-202ENST00000568095 TLN1Q9Y490 2541 aaKnown RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SPTBN2O15020 2390 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 DCHS2Q6V1P9 2916 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 URB1O60287 2271 aaKnown RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 IGKV1D-17A0A075B6S4 117 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 E9PLD3 99 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SNAI2O43623 268 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SMIM13P0DJ93 91 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 PRDX2P32119 198 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 CFHR2P36980 270 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 ID1P41134 155 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SSBP2P81877 361 aaPredicted RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 C19orf54Q5BKX5 351 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF474Q6S9Z5 364 aaPredicted RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 OR10W1Q8NGF6 305 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 KLF14Q8TD94 323 aaPredicted RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 TM2D2Q9BX73 214 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 GTSF1LQ9H1H1 148 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 THYN1Q9P016 225 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 PIEZO2Q9H5I5 2752 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 CHEK1O14757 476 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SRSF1Q07955 248 aaKnown RBP eCLIP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 SCGB2A2Q13296 93 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 PRR31Q5SQ13 230 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 ZCCHC24Q8N2G6 241 aaKnown RBP4.33□□□□□ -1.72
LINC01541-202ENST00000568095 GNG12Q9UBI6 72 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 PRO0461Q9UI25 63 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 HILPDAQ9Y5L2 63 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 CFAP46Q8IYW2 2715 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 USP24Q9UPU5 2620 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 CHD8Q9HCK8 2581 aa4.33□□□□□ -1.72
LINC01541-202ENST00000568095 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 TCRAP04437 139 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 GP9P14770 177 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 FCGR2BP31994 310 aaPredicted RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 RAB9AP51151 201 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 Q86TA4 180 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 PDPNQ86YL7 162 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 NAA38Q9BRA0 125 aaKnown RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 FAM234AQ9H0X4 552 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 TSSC4Q9Y5U2 329 aaPredicted RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 SLC25A15Q9Y619 301 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 ZGRF1Q86YA3 2104 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 A0A1W2PRD5 423 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 A0A1W2PRF3 423 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 A0A1W2PRM7 423 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 WI2-2373I1.2A0A1W2PRP0 233 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 CRYGCP07315 174 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 FAM106CPP0CH98 169 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF137PP52743 207 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 SMAGPQ0VAQ4 97 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 FAM106AQ4KMX7 169 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 CALYQ9NYX4 217 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 Q9UFV3 132 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 DSCAML1Q8TD84 2053 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 NCOR2Q9Y618 2525 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 IGSF10Q6WRI0 2623 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 PKD1L2Q7Z442 2459 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 A0A1B0GUT8 65 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 PGPA6NDG6 321 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 SRRM5B3KS81 715 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 TSPAN13O95857 204 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 SLC25A5P05141 298 aaKnown RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 LOXL1Q08397 574 aaPredicted RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 LINC00305Q7Z4B0 112 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 PCP2Q8IVA1 136 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF502Q8TBZ5 544 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
LINC01541-202ENST00000568095 ZNF48Q96MX3 618 aaPredicted RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 SPAG8Q99932 426 aaPredicted RBP4.32□□□□□ -1.72
LINC01541-202ENST00000568095 PRR14LQ5THK1 2151 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms