RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 TIMM23O14925 209 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 IGHV1-8P0DP01 117 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 CNTFRP26992 372 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 HERVK_113P61574 105 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 GTSF1LQ9H1H1 148 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 DPM3Q9P2X0 92 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 BDP1A6H8Y1 2624 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 IGHG3P01860 377 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 OR5A1Q8NGJ0 315 aa8.47□□□□□ -1.05
USB1-212ENST00000566082 FABP5P3A8MUU1 101 aa8.46□□□□□ -1.05
USB1-212ENST00000566082 CDKN1BP46527 198 aa8.46□□□□□ -1.05
USB1-212ENST00000566082 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.05
USB1-212ENST00000566082 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.05
USB1-212ENST00000566082 MRPL16Q9NX20 251 aaKnown RBP8.46□□□□□ -1.05
USB1-212ENST00000566082 SIGLEC9Q9Y336 463 aa8.46□□□□□ -1.05
USB1-212ENST00000566082 SMAD7O15105 426 aaKnown RBP8.46□□□□□ -1.06
USB1-212ENST00000566082 ATP5LO75964 103 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 POU2AF1Q16633 256 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 PVRIGQ6DKI7 326 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 FAM169BQ8N8A8 192 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 OR1N2Q8NGR9 330 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 PHLDA3Q9Y5J5 127 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 NAV3Q8IVL0 2385 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 TMEM238LA0A1B0GVL6 79 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 A6NJY4 79 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 APOMO95445 188 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 TGFAP01135 160 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 COX8AP10176 69 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 WIPF2Q8TF74 440 aaPredicted RBP8.46□□□□□ -1.06
USB1-212ENST00000566082 DDB2Q92466 427 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 ZNF503Q96F45 646 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 FAM167A-AS1Q96KT0 104 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 ATG2AQ2TAZ0 1938 aa8.46□□□□□ -1.06
USB1-212ENST00000566082 TMEM178BH3BS89 294 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 DPM2O94777 84 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 CT83Q5H943 113 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 ZC2HC1BQ5TFG8 222 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 DEFB125Q8N687 156 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 ZNF479Q96JC4 524 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 GFRA4Q9GZZ7 299 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 NBR2O15453 112 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 SH2D1AO60880 128 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 NDUFB8O95169 186 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 KLF5Q13887 457 aaPredicted RBP8.45□□□□□ -1.06
USB1-212ENST00000566082 PSG3Q16557 428 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 RNASE6Q93091 150 aaKnown RBP8.45□□□□□ -1.06
USB1-212ENST00000566082 ZFHX2Q9C0A1 2572 aaPredicted RBP8.45□□□□□ -1.06
USB1-212ENST00000566082 IGHV1-3A0A0C4DH29 117 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 IGKCP01834 107 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 DOPEY2Q9Y3R5 2298 aa8.45□□□□□ -1.06
USB1-212ENST00000566082 A0A1B0GV72 72 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 K7EP13 123 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 LINC00310P59036 64 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 SCGB3A1Q96QR1 104 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 METTL26Q96S19 204 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 IGLV1-44P01699 117 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 HTN1P15515 57 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 ZNF833PQ6ZTB9 187 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 ARPC1AQ92747 370 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 NXT2Q9NPJ8 142 aaKnown RBP8.44□□□□□ -1.06
USB1-212ENST00000566082 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.44□□□□□ -1.06
USB1-212ENST00000566082 WISP2O76076 250 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 DLX6P56179 175 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 PAX2Q02962 417 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 FOXC1Q12948 553 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 MTURNQ8N3F0 131 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 C8orf49Q96NF6 230 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 SIGMAR1Q99720 223 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 VKORC1Q9BQB6 163 aa8.44□□□□□ -1.06
USB1-212ENST00000566082 TANC2Q9HCD6 1990 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 LRP4O75096 1905 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 C10orf142B7Z368 130 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 E7EUB6 86 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 SAP30O75446 220 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 IGLV2-8P01709 118 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 APOBEC3AP31941 199 aaPredicted RBP8.43□□□□□ -1.06
USB1-212ENST00000566082 ADIPOQQ15848 244 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 GDF5OSQ5U4N7 250 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 GTSF1Q8WW33 167 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 C17orf77Q96MU5 243 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 MRPL36Q9P0J6 103 aaKnown RBP8.43□□□□□ -1.06
USB1-212ENST00000566082 C2orf70A6NJV1 201 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 CDX4O14627 284 aaPredicted RBP8.43□□□□□ -1.06
USB1-212ENST00000566082 TAX1BP3O14907 124 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 PPBPP02775 128 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 FAM57AQ8TBR7 257 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 ZNF747Q9BV97 191 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 SIGLEC8Q9NYZ4 499 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 RAXQ9Y2V3 346 aa8.43□□□□□ -1.06
USB1-212ENST00000566082 KIAA1549Q9HCM3 1950 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 PIEZO2Q9H5I5 2752 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
USB1-212ENST00000566082 MBD3L4A6NDZ8 208 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 MBD3L3A6NE82 208 aaPredicted RBP8.42□□□□□ -1.06
USB1-212ENST00000566082 C9orf118A6NHY6 69 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms