RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RRAS2P62070 204 aaPredicted RBP8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 IFITM3Q01628 133 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 RAB31Q13636 194 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 GSG1LQ6UXU4 331 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 PATE2Q6UY27 113 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 RNF182Q8N6D2 247 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 OR8A1Q8NGG7 326 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 ARV1Q9H2C2 271 aa8.64□□□□□ -1.03
GTF3C1-204ENST00000564664 HERC2O95714 4834 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 LINC00854A0A1B0GVQ3 168 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 BOLA2-SMG1P6H3BVE0 249 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 M0R2Z0 102 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 SCGB1D2O95969 90 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 MBPP02686 304 aaPredicted RBP8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 IL7P13232 177 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 BTCP35070 178 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 TAS2R60P59551 318 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 RHOBP62745 196 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 SOHLH1Q5JUK2 328 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 IGFL4Q6B9Z1 124 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 LCN15Q6UWW0 184 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 BPIFA4PQ86YQ2 179 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 UHRF2Q96PU4 802 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 C20orf144Q9BQM9 153 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 SLC50A1Q9BRV3 221 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
GTF3C1-204ENST00000564664 C7orf66A4D0T2 115 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 ZNF705GA8MUZ8 300 aaPredicted RBP8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 L7N2F9 121 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 AGPAT2O15120 278 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 MRPS12O15235 138 aaKnown RBP8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 HTN3P15516 51 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 CDKN1BP46527 198 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 VAMP2P63027 116 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 HIST1H1AQ02539 215 aaPredicted RBP8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 TMEM88Q6PEY1 159 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 ZNF493Q6ZR52 646 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 Q6ZR54 194 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 LINC00305Q7Z4B0 112 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 RPUSD4Q96CM3 377 aaKnown RBP8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 LINC01587Q99440 93 aa8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 RCL1Q9Y2P8 373 aaKnown RBP8.62□□□□□ -1.03
GTF3C1-204ENST00000564664 A0A1B0GVY2 172 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 CBY3A6NI87 242 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 PRSS29PA6NIE9 313 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 M0R2N4 97 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 RTL8CO15255 209 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 LYRM1O43325 122 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 CCNKO75909 580 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 SLC38A11Q08AI6 406 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 GUK1Q16774 197 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 Q6ZRG5 221 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 C16orf74Q96GX8 76 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 C20orf85Q9H1P6 137 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 DNAJC4Q9NNZ3 241 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 ZNF331Q9NQX6 463 aaPredicted RBP8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 PXMP4Q9Y6I8 212 aa8.61□□□□□ -1.03
GTF3C1-204ENST00000564664 H7BYZ3 331 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 PLA2G10O15496 165 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 COX7A2P2O60397 106 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 TCRBP04435 133 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 PVALBP20472 110 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 ARL16Q0P5N6 197 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 C10orf113Q5VZT2 155 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 BAP18Q8IXM2 172 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 C12orf45Q8N5I9 185 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 OR1L4Q8NGR5 311 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 OR10J6PQ8NGY7 276 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 ZNF431Q8TF32 576 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 TMEM37Q8WXS4 190 aa8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
GTF3C1-204ENST00000564664 TRAV12-2A0A075B6T6 113 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 PLAC8L1A1L4L8 177 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 C5orf51A6NDU8 294 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 ATP5G1P05496 136 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 DEFB130BP0DP73 79 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 DEFB130AP0DP74 79 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 AZU1P20160 251 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 S100A11P31949 105 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 ATP5G3P48201 142 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 CAMLGP49069 296 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 C2orf50Q96LR7 162 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 PFDN5Q99471 154 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 MGST2Q99735 147 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
GTF3C1-204ENST00000564664 DNAH17Q9UFH2 4485 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 ZNF253O75346 499 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 MED14OSP0DP75 135 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 RPL29P47914 159 aaKnown RBP8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 CAV2P51636 162 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 ASAH1Q13510 395 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 VWC2Q2TAL6 325 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 C1orf134Q5TEV5 83 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 NRARPQ7Z6K4 114 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 CCDC28AQ8IWP9 274 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 TMEM263Q8WUH6 116 aaKnown RBP8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 SAT2Q96F10 170 aaPredicted RBP8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms