RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 SMIM8Q96KF7 97 aa11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.52
HDGFL3-203ENST00000563404 M0R2Z0 102 aa11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 CNN1P51911 297 aaKnown RBP11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 FCN2Q15485 313 aa11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 SPINK13Q1W4C9 94 aa11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 TMEM208Q9BTX3 173 aa11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 SLC45A2Q9UMX9 530 aa11.82□□□□□ -0.52
HDGFL3-203ENST00000563404 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 WRBO00258 174 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 SIX6O95475 246 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 CFDP00746 253 aaPredicted RBP11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 RLN2P04090 185 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 GIPP09681 153 aaPredicted RBP11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 ORM2P19652 201 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 CXCL3P19876 107 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 AZU1P20160 251 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 POLR2GP62487 172 aaKnown RBP eCLIP11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
HDGFL3-203ENST00000563404 DNAH5Q8TE73 4624 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 K7EPK0 472 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 TSC22D2O75157 780 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 RAP2BP61225 183 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 TNP2Q05952 138 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 BAP18Q8IXM2 172 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 C15orf53Q8NAA6 179 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 OR1B1Q8NGR6 318 aa11.8□□□□□ -0.52
HDGFL3-203ENST00000563404 TRAV12-2A0A075B6T6 113 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 LYRM9A8MSI8 78 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 INSP01308 110 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 PET100P0DJ07 73 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 FGL1Q08830 312 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 BPIFCQ8NFQ6 507 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 PPP1R1CQ8WVI7 109 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 C11orf1Q9H5F2 150 aa11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 RCL1Q9Y2P8 373 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-203ENST00000563404 H3BP45 60 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 H3BRN7 92 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 DUSP14O95147 198 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 DEFB130BP0DP73 79 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 DEFB130AP0DP74 79 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 PRB4P10163 310 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 FAM3BP58499 235 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 RAB32Q13637 225 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 SPANXN5Q5MJ07 72 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 ACOT7LQ6ZUV0 252 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 TMEM147Q9BVK8 224 aa11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 SLC25A39Q9BZJ4 359 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-203ENST00000563404 E5RGE8 158 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 L7N2F9 121 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 SSSCA1O60232 199 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 MPC2O95563 127 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 SCGB1D2O95969 90 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 TSPOP30536 169 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 VAMP2P63027 116 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 AKR1C1Q04828 323 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 GPR82Q96P67 336 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 PSENENQ9NZ42 101 aa11.77□□□□□ -0.53
HDGFL3-203ENST00000563404 NBDYA0A0U1RRE5 68 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 F5H768 121 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 CYP2G1PQ6ZSU1 146 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 TMEM144Q7Z5S9 345 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 ATG101Q9BSB4 218 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 SHANK2-AS3Q9BTD1 123 aa11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 LSM5Q9Y4Y9 91 aaKnown RBP11.76□□□□□ -0.53
HDGFL3-203ENST00000563404 PMS2P5A8MQ11 134 aa11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 BOLA2-SMG1P6H3BVE0 249 aa11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 NUDT3O95989 172 aa11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 S100A10P60903 97 aa11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 ZNF738Q8NE65 137 aa11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
HDGFL3-203ENST00000563404 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 H0YIZ8 118 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 CCNKO75909 580 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 B2MP61769 119 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 C6orf223Q8N319 242 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 OR8A1Q8NGG7 326 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 GGACTQ9BVM4 153 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 SLC25A31Q9H0C2 315 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 HIGD1AQ9Y241 93 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 LINC00588Q9Y4M8 146 aa11.74□□□□□ -0.53
HDGFL3-203ENST00000563404 SMCO3A2RU48 225 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 BCAP31P51572 246 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 PLP1P60201 277 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 HIST1H1AQ02539 215 aaPredicted RBP11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 RNF141Q8WVD5 230 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 LINC01587Q99440 93 aa11.73□□□□□ -0.53
HDGFL3-203ENST00000563404 A0A087X0K7 114 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 CBY3A6NI87 242 aa11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 MRPS12O15235 138 aaKnown RBP11.72□□□□□ -0.53
HDGFL3-203ENST00000563404 HYPMO75409 117 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms